Pairwise Alignments

Query, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  269 bits (687), Expect = 8e-77
 Identities = 150/333 (45%), Positives = 207/333 (62%), Gaps = 21/333 (6%)

Query: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMAGERGIDPARHAQLRTAYGFDK 60
           ML F+L R+   +PT I ++L  F L +++PGDP+  MAGE   DPA    LR  Y  D 
Sbjct: 1   MLMFILRRLLSSIPTLILVSLFVFTLQKLLPGDPVLAMAGEER-DPAVMEYLRDKYRLDD 59

Query: 61  PVIVQYGIYIGRVLHGDLGKSLITQESVANEFLALFPATVELGVCAILFALLLGLPAGII 120
           P+ +QY  ++G VL GDLG SL T+++V     +  P T+EL V A+L ALL+G+P GII
Sbjct: 60  PIPLQYLNWVGNVLTGDLGTSLRTEQAVTTLLASKLPVTIELAVLALLIALLIGIPTGII 119

Query: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYFVEPRTG 180
           +AVR+ +  D+G    +L+G S+P FW G+LLI+ F+V+L W P SG + +         
Sbjct: 120 SAVRKGTAVDYGANVVALSGISIPHFWLGILLIMVFAVKLQWLPASGFVPMG-------- 171

Query: 181 FLLVDALRAGEVDAFWSALHHLVLPAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240
                       + F   L  L+LPA VLG     ++ R TRSAMLEVL  DY+RTARAK
Sbjct: 172 ------------EDFGQNLKTLILPAFVLGAGLSGILMRHTRSAMLEVLRTDYVRTARAK 219

Query: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300
           GL    V+  HALRNAL+P+VT+  L  G L  GA+LTE +FS PG GK +++A+  RDY
Sbjct: 220 GLFPRTVILKHALRNALMPIVTLTTLLFGELLGGAVLTEQVFSIPGFGKMIVDAVFNRDY 279

Query: 301 PVLQGGMLLLGGIVMLVNLLVDVTYGIINPRIR 333
            V+QG +L +    +++NLL DV Y +INPR+R
Sbjct: 280 AVVQGVVLCVAIGFLMLNLLADVLYRLINPRLR 312