Pairwise Alignments

Query, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

Subject, 339 a.a., Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  428 bits (1101), Expect = e-125
 Identities = 209/336 (62%), Positives = 268/336 (79%), Gaps = 3/336 (0%)

Query: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMAGERGIDPARHAQLRTAYGFDK 60
           ML+F+L R+ L++PTFIG+TLL F  + M+PGDP+  MAGERGI P RHAQL    G DK
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60

Query: 61  PVIVQYGIYIGRVLHGDLGKSLITQESVANEFLALFPATVELGVCAILFALLLGLPAGII 120
           P+  QY  YI  V+HGDLG SL ++  V +EF+  F AT+ELGVCA++FA+ +G+P G++
Sbjct: 61  PMWQQYLHYIWGVMHGDLGISLKSRIPVWDEFVPRFKATLELGVCAMIFAVAVGIPVGVL 120

Query: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYFVE---P 177
           AAV+R SIFDH  +  +LTGYSMPIFWWG++LI+  SV    TPVSGR++   F++   P
Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDTNP 180

Query: 178 RTGFLLVDALRAGEVDAFWSALHHLVLPAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTA 237
            TGF+L+D    GE   F  AL H++LPA+VLGT+PLAVI RMTRS+MLEVLGEDYIRTA
Sbjct: 181 LTGFMLIDTAIWGEEGNFIDALAHMILPAMVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 238 RAKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGR 297
           RAKGL+R+RV+ +HALRNA++PVVTVIGLQVG L  GAILTETIFSWPG+G+WLI+A+ R
Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 298 RDYPVLQGGMLLLGGIVMLVNLLVDVTYGIINPRIR 333
           RDYPV+QGG+LL+  +++LVNLLVD+ YG++NPRIR
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336