Pairwise Alignments

Query, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Escherichia coli ECRC99

 Score =  426 bits (1095), Expect = e-124
 Identities = 208/336 (61%), Positives = 266/336 (79%), Gaps = 3/336 (0%)

Query: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMAGERGIDPARHAQLRTAYGFDK 60
           ML+F+L R+ L++PTFIG+TLL F  + M+PGDP+  MAGERGI P RHAQL    G DK
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60

Query: 61  PVIVQYGIYIGRVLHGDLGKSLITQESVANEFLALFPATVELGVCAILFALLLGLPAGII 120
           P+  QY  YI  V+HGDLG S+ ++  V  EF+  F AT+ELGVCA++FA  +G+P G++
Sbjct: 61  PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL 120

Query: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYFVE---P 177
           AAV+R SIFDH  +  +LTGYSMPIFWWG++LI+  SV    TPVSGR++   F++   P
Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP 180

Query: 178 RTGFLLVDALRAGEVDAFWSALHHLVLPAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTA 237
            TGF+L+D    GE   F  A+ H++LPAIVLGT+PLAVI RMTRS+MLEVLGEDYIRTA
Sbjct: 181 LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 238 RAKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGR 297
           RAKGL+R+RV+ +HALRNA++PVVTVIGLQVG L  GAILTETIFSWPG+G+WLI+A+ R
Sbjct: 241 RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 298 RDYPVLQGGMLLLGGIVMLVNLLVDVTYGIINPRIR 333
           RDYPV+QGG+LL+  +++LVNLLVD+ YG++NPRIR
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336