Pairwise Alignments

Query, 474 a.a., efflux transporter outer membrane subunit from Variovorax sp. OAS795

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  434 bits (1116), Expect = e-126
 Identities = 241/477 (50%), Positives = 315/477 (66%), Gaps = 10/477 (2%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAPPVPTTFPGDPA----QPAGPAAAAVPWEDF 56
           M+K L+  A+ A  +L+GCSLIP Y+RP  PV   FP  PA    Q    AAA   W+ F
Sbjct: 1   MSKSLLSLAVTA-FVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQF 59

Query: 57  FTDARLNGLIRTALENNRDLRVSVLNIEQARAQFQIQRSSLFPAVGVTGSGSRSSPNPYQ 116
           F D  L  LI+TAL NNRDLRV+ LNI+   AQ+QIQR+ LFPAV  TGSGSRS   P +
Sbjct: 60  FHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSR-TPAR 118

Query: 117 AFDSSVGSVSQQYSVNLGITAWEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVA 176
              +   ++S QYS  LGI+++E+D FGR+R+L ++AL +Y ATEE+R++ Q+SL+A+VA
Sbjct: 119 LSQTGESTISSQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVA 178

Query: 177 TGWLTLIADDELLELTRQTLVTREESVRLTKLRFDNGVSSELDFQAANSLAETARASYAQ 236
             +LT  AD ELL+LT+ TL   E+S +LT    + GV+S LD   + +  E AR + A+
Sbjct: 179 NAYLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALAR 238

Query: 237 QQRARMQDENALALLLGAPVPASATAGGVKGLDSVQPMPDVPAGLPSDLLAERPDIRAAE 296
             R   QDEN+L LLLG  +PA+ T+  +    S   + +VPAGLPSDLL  RPDI  AE
Sbjct: 239 YTRQVAQDENSLTLLLGTGLPANITSKPL----SDDLLSEVPAGLPSDLLQRRPDIVQAE 294

Query: 297 QQLIGANANIGAARANFFPRVSLTTTLGTVSSEFSGLFDSGSKAWSFAPSITLPIFDAGR 356
             L  ANANIGAARA FFP ++LT + GT S    GLF  GS  WSFAP I +PIF+AG 
Sbjct: 295 YNLKAANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGS 354

Query: 357 NRATLDSARAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQAEAEAVRFRL 416
            RA+LD ++  +EI VA YEK+IQT F+EV+D LA R T  +Q+ AQR    A    +RL
Sbjct: 355 LRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRL 414

Query: 417 SDMRYRNGIASALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGWATRDSK 473
           ++ RYR G+ S L  LDAQR L++AQQS +T RL QL ++V LYK LGGGW  + +K
Sbjct: 415 AERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAK 471