Pairwise Alignments

Query, 1053 a.a., efflux RND transporter permease subunit from Variovorax sp. OAS795

Subject, 1054 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score = 1942 bits (5031), Expect = 0.0
 Identities = 1000/1050 (95%), Positives = 1031/1050 (98%)

Query: 1    MAKFFIDRPIFAWVIALFVLVMGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60
            MAKFFIDRPIFAWVIALF+LV+GGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS
Sbjct: 1    MAKFFIDRPIFAWVIALFILVVGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60

Query: 61   VLSVIEREMNGSPGLIYMESVAQADGSGTITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120
            VLSVIEREMNGSPGLIYMESVAQADG+G+ITISFEAGTNDDLAQVDVQNRLSRATPRLPA
Sbjct: 61   VLSVIEREMNGSPGLIYMESVAQADGTGSITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120

Query: 121  AVTQQGVRVDKARNNFLMFVMLSSDNPAFDPVALGDYTARNIVPELQRVIGVGQAQLFGS 180
            AVTQQGVRVDK+RNNFLMFVMLSSDNP FDPVALGDY ARN+VPELQRV+GVGQAQLFGS
Sbjct: 121  AVTQQGVRVDKSRNNFLMFVMLSSDNPNFDPVALGDYAARNVVPELQRVVGVGQAQLFGS 180

Query: 181  ENAMRIWIDPAKLQGYALSATDVNNAIRAQNAQVSSGTLGDLPNIPGQAIAATVVVNGQL 240
            ENAMRIWIDPAKLQGY LSATDVNNAIRAQNAQVSSGT+GDLPNIPGQAIAATVVVNGQL
Sbjct: 181  ENAMRIWIDPAKLQGYNLSATDVNNAIRAQNAQVSSGTIGDLPNIPGQAIAATVVVNGQL 240

Query: 241  ANVEQFKNIVLRANTNGSTVRLKDVARVELGGQSYATSARLNGVPAVGIGVQPTPNGNAL 300
            ANV+QFK+IVLRANT+GSTVRLKDVARVELGGQSYATSARLNGVPAVG+GVQPTPNGNAL
Sbjct: 241  ANVDQFKDIVLRANTDGSTVRLKDVARVELGGQSYATSARLNGVPAVGVGVQPTPNGNAL 300

Query: 301  QSAKAIRAKMAELERFFPPGVKWDIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360
            QSAKAIRAKMAELER+FP GVKW IPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ
Sbjct: 301  QSAKAIRAKMAELERYFPQGVKWAIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360

Query: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420
            NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
Sbjct: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420

Query: 421  SEEGLSPLEATRKAMKQISGAIIGVTVVLISVFVPLAFFAGSTGNIYRQFSAVMVTSIAF 480
            SEEGLSPLEATRKAM+QISGAIIGVTVVL+SVFVPLAFFAGSTGNIYRQFSAVMV SI F
Sbjct: 421  SEEGLSPLEATRKAMRQISGAIIGVTVVLVSVFVPLAFFAGSTGNIYRQFSAVMVASIGF 480

Query: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFTRTAKGYESVVARILKRAARY 540
            SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGF+RTAKGYES+VAR+L+RAARY
Sbjct: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFSRTAKGYESLVARVLRRAARY 540

Query: 541  LVIYAVIIGAVVFTYMRLPSSFLPAEDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ 600
            LVIY  IIGAVVFTY RLPSSFLP EDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ
Sbjct: 541  LVIYVAIIGAVVFTYTRLPSSFLPQEDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ 600

Query: 601  PEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWEERKDPAHSASALAGRAFGALSGIRDAFI 660
            PEVQSMVGVMGFSFSGQGQNAGLAFVTLKDW+ERKDPAHSASALAGRAFGALSGIRDAFI
Sbjct: 601  PEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWDERKDPAHSASALAGRAFGALSGIRDAFI 660

Query: 661  YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMAGQSKILAQVRPDGLEDA 720
            YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMA QSKIL+QVRPDGLEDA
Sbjct: 661  YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMASQSKILSQVRPDGLEDA 720

Query: 721  PQLQIDIDRDKANALGVSFDAINATLSTGLGSSYINDFPNRGRLQRVMVQADAPARMQPD 780
            PQLQIDIDRDKANALGVSFDAINATLST LGSSYINDFPNRGRLQRV+VQADAPARMQPD
Sbjct: 721  PQLQIDIDRDKANALGVSFDAINATLSTALGSSYINDFPNRGRLQRVVVQADAPARMQPD 780

Query: 781  DLLRLNASNSQGQPVPLSAFATTRWVKGATQTVRYNGYPAIRISGDAAPGFSTGAAMAEM 840
            DLL+LNASN+QG PVPLSAFATT+WV GATQTVRYNGYPAIRISGDAA G+STGAAMAEM
Sbjct: 781  DLLKLNASNTQGLPVPLSAFATTKWVTGATQTVRYNGYPAIRISGDAAAGYSTGAAMAEM 840

Query: 841  EKLARQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWTIPLAVILV 900
            EKLA QLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESW+IPL+VILV
Sbjct: 841  EKLASQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWSIPLSVILV 900

Query: 901  VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGIIESAL 960
            VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKG+IESAL
Sbjct: 901  VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGVIESAL 960

Query: 961  AAAHLRFRPIVMTSLAFGLGVVPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF 1020
            AAAHLRFRPIVMTSLAFGLGV+PLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF
Sbjct: 961  AAAHLRFRPIVMTSLAFGLGVLPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF 1020

Query: 1021 FVVVRTLFKGSARQHEADKRHAEAAGIMEE 1050
            FVVVR+LFKGSARQ EADKRHAEAAGI EE
Sbjct: 1021 FVVVRSLFKGSARQREADKRHAEAAGITEE 1050