Pairwise Alignments

Query, 1053 a.a., efflux RND transporter permease subunit from Variovorax sp. OAS795

Subject, 1034 a.a., Multidrug export protein AcrF from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 1147 bits (2966), Expect = 0.0
 Identities = 579/1034 (55%), Positives = 757/1034 (73%), Gaps = 4/1034 (0%)

Query: 1    MAKFFIDRPIFAWVIALFVLVMGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60
            MA FFI RPIFAWV+A+ +++ G +AI QLP++QYP +APPA+ ++  YPGA AQT++D+
Sbjct: 1    MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT 60

Query: 61   VLSVIEREMNGSPGLIYMESVAQADGSGTITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120
            V  VIE+ MNG   L+YM S + + GS TIT++F++GT+ D+AQV VQN+L  ATP LP 
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ 120

Query: 121  AVTQQGVRVDKARNNFLMFVMLSSDNPAFDPVALGDYTARNIVPELQRVIGVGQAQLFGS 180
             V QQG+ V+K+ +++LM     SDNP      + DY A N+   L R+ GVG  QLFG+
Sbjct: 121  EVQQQGISVEKSSSSYLMVAGFVSDNPDTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA 180

Query: 181  ENAMRIWIDPAKLQGYALSATDVNNAIRAQNAQVSSGTLGDLPNIPGQAIAATVVVNGQL 240
            + AMRIW+D   L  Y L+  DV N ++ QN Q+++G LG  P +PGQ + A+++   +L
Sbjct: 181  QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL 240

Query: 241  ANVEQFKNIVLRANTNGSTVRLKDVARVELGGQSYATSARLNGVPAVGIGVQPTPNGNAL 300
             N E+F  + LR N++GS VRLKDVARVELGG++Y   AR+NG PA G+G++     NAL
Sbjct: 241  KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL 300

Query: 301  QSAKAIRAKMAELERFFPPGVKWDIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360
             +AKAI+AK+AEL+ FFP G+K   PYD++ FVQ+SI EVVKTL EA+ LVF+VM+LFLQ
Sbjct: 301  DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ 360

Query: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420
            N R T+IPTI VP+ LLGTFA L A G+SIN LTMFGMVL IG++VDDAIVVVENVER+M
Sbjct: 361  NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 421  SEEGLSPLEATRKAMKQISGAIIGVTVVLISVFVPLAFFAGSTGNIYRQFSAVMVTSIAF 480
             E+ L P EAT K+M QI GA++G+ +VL +VF+P+AFF GSTG IYRQFS  +V+++A 
Sbjct: 421  MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480

Query: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFTRTAKGYESVVARILKRAARY 540
            S  +AL LTPALCATLLKPV A HH  K GFFGWFN  F  +   Y + V +IL    RY
Sbjct: 481  SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY 540

Query: 541  LVIYAVIIGAVVFTYMRLPSSFLPAEDQGNIIVNVQLPPGATQERALSVMQQVEGFILK- 599
            L+IYA+I+  +V  ++RLPSSFLP EDQG  +  +QLP GATQER   V+ QV  + LK 
Sbjct: 541  LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN 600

Query: 600  -QPEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWEERKDPAHSASALAGRAFGALSGIRDA 658
             +  V+S+  V GFSFSGQ QNAG+AFV+LK WEER    +SA A+  RA   L  IRD 
Sbjct: 601  EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDG 660

Query: 659  FIYPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMAGQSKI-LAQVRPDGL 717
            F+ P + P I ELG A+GF F L D++G GH+AL  ARNQLLGMA Q    L  VRP+GL
Sbjct: 661  FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL 720

Query: 718  EDAPQLQIDIDRDKANALGVSFDAINATLSTGLGSSYINDFPNRGRLQRVMVQADAPARM 777
            ED  Q ++++D++KA ALGVS   IN T+ST LG +Y+NDF +RGR+++V VQADA  RM
Sbjct: 721  EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM 780

Query: 778  QPDDLLRLNASNSQGQPVPLSAFATTRWVKGATQTVRYNGYPAIRISGDAAPGFSTGAAM 837
             P+D+ +L   ++ G+ VP SAF T+ WV G+ +  RYNG P++ I G+AAPG S+G AM
Sbjct: 781  LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM 840

Query: 838  AEMEKLARQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWTIPLAV 897
            A ME LA +LP G G++WTG S +E+L+G+QA  L   + + VFLCLAALYESW+IP++V
Sbjct: 841  ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV 900

Query: 898  ILVVPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDL-QAQGKGII 956
            +LVVPLG++GVLLA  L    NDVYF VGL+T IGLSAKNAILI+EFAKDL + +GKG++
Sbjct: 901  MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV 960

Query: 957  ESALAAAHLRFRPIVMTSLAFGLGVVPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIF 1016
            E+ L A  +R RPI+MTSLAF LGV+PL +++GAGS +Q A+G GV+GGMV+ T LA+ F
Sbjct: 961  EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF 1020

Query: 1017 VPVFFVVVRTLFKG 1030
            VPVFFVV+R  FKG
Sbjct: 1021 VPVFFVVIRRCFKG 1034