Pairwise Alignments

Query, 439 a.a., carbohydrate ABC transporter substrate-binding protein, CUT1 family from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 444 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Pectobacterium carotovorum WPP14

 Score =  189 bits (481), Expect = 1e-52
 Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 17/435 (3%)

Query: 3   SIRKMFSVLALLSLAANAFAAAPAEFWYSHSGAAGSAIADLCRSFNAPREEGDRLHCVRQ 62
           +IR   + +AL  ++A+A AA    FW+S  G  G  +  L   FN    +  ++  V +
Sbjct: 11  AIRTAAACVALALMSASAQAATEIPFWHSMEGELGKEVNSLADRFNKAHSDV-KIVPVYK 69

Query: 63  GSYEQTLQKTVAAYRAGIGPALVEIYDVATPDMLLGGATRPVEAIMADHHRAYPDDTFLP 122
           G+YEQ L   +AAYRAG  PA++++Y+V T  M+   A +PV  +  +    + +  F+P
Sbjct: 70  GNYEQNLAAGIAAYRAGNAPAILQVYEVGTATMMASKAIKPVYEVFKESGINFDESVFVP 129

Query: 123 ALRRYYAD-DHGTLAAQPFAASTAVLYTHRKALAAAGI--SEPPATWEAFADALRALKKN 179
            +  YY D   G L +QPF +ST VLY ++ A   AG+   +PP TW+  A+    L+  
Sbjct: 130 TVSGYYTDAKSGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQQMAEYTAKLRAA 189

Query: 180 GQQCPLVSAFAPWIWLEQTSAAQGTDVAIRSAGGDR----YQFDEGPHLRLMKDLAQWTS 235
           G +C   S +  WI +E  SA  G  VA ++ G D      +F++   ++ ++ L     
Sbjct: 190 GMKCGYASGWQGWIQIENFSAWHGLPVASKNNGFDGTDAVLEFNKPTQVKHIQLLQDMNK 249

Query: 236 QGLVVHEDATRSGQQALAFATDDCAMLLDSTGAWNVVHSTLKSDIQVTALPIYAATQRRA 295
           +G   +    R  +    F   DCA+   S+G+   +    K +  V  +P Y A  + A
Sbjct: 250 KGDFTY--FGRKDEPTEKFYNGDCAITTASSGSLANIREHAKFNYGVGMMP-YDADAKGA 306

Query: 296 ---NVPGGSSLWVMRGHSVRDYRLVSEFLAFVLQPDNQLIFSARTGYLPVTQAAAARLQS 352
               + GG+SLWVM G     Y+ V+EF+ F+ +P+N   +  +TGYLP+T AA    Q 
Sbjct: 307 PQNAIIGGASLWVMGGKDAATYKGVAEFMKFLAEPENAAEWHQKTGYLPITTAAYELTQK 366

Query: 353 AA---SEPSAITVGLTALDDIDGQPSAPLRCGFITLMRLIWSQEMENALAGRQSIDLALR 409
                  P A       L+      +  LR G +  +R +  +E+E+   G+++   AL 
Sbjct: 367 QGFYEKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTVVDEELESVWTGKKTPQQALD 426

Query: 410 QTTLRANELLGLFQQ 424
               R N LL  F+Q
Sbjct: 427 SAVERGNALLRRFEQ 441