Pairwise Alignments

Query, 521 a.a., PAS from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC102

 Score =  231 bits (590), Expect = 4e-65
 Identities = 164/534 (30%), Positives = 259/534 (48%), Gaps = 62/534 (11%)

Query: 1   MRNNQPITQHERTFPAEQRLISTTDTRGTITYCNDAFVDISGYSEAELLGAAHNTVRHPD 60
           M ++  +TQ       +  L+STTD +  IT+ ND FV +SG++  EL G  HN VRHPD
Sbjct: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD 60

Query: 61  VPPAVFEHMWTTLKSGQPWMGIVKNRCKNGDHYWVNAYVTPVLENRQVVGFESVRIKPTA 120
           +P A F  MW TLK G+PW GIVKNR KNGDHYWV A   P++   ++ G+ S+R + T 
Sbjct: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120

Query: 121 EQVRRAEALYTRLNKGKS------AVPGRDKWLPVLQD----W-------LPFILVSQLS 163
           E++   E LY  LN G++       +  R  WL  L      W       L FIL++ + 
Sbjct: 121 EEIAAVEPLYKALNAGRTGKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAML 180

Query: 164 FLIGVWLNSHWGFALAAALSVPLGLLGLSWQ-----QRGTKRLLRLA--EQTTSDPLIAQ 216
           + +   + ++    +  AL V L      WQ     +   ++ L++A  E+ + + L   
Sbjct: 181 WFVAAPVVTY----ILCALVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHL--- 233

Query: 217 MYTDSRGPQARLEMSILSQEARMKTCLTRLQDTAEHLNSQARQSNSLANASSIGLERQRV 276
               +R  +  L +  + Q   M  C   + D +  ++S    S +LA     G +    
Sbjct: 234 ----NRSDELGLTLRAVGQLGLM--CRWLINDVSSQVSSVRNGSETLAK----GTDELNE 283

Query: 277 ETEQVAAAINQMAATTQEVASHVNRAADATQQANELTRRGRDIAGETREAIQRLSTSVGE 336
            T+Q    + Q  AT  ++A+ V + +     A++L+    + A +  EA+  +      
Sbjct: 284 HTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIK---- 339

Query: 337 TGLTVTRLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQL 396
              T+  +A  +  IG +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR L
Sbjct: 340 ---TMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHL 396

Query: 397 AQRTAESTGQIHGLIAKLQQTATDAVHTMDTGRRQAEEGVARVLEADQALVGISEAVANI 456
           A R+A +   I  LI              D    + + G  +V  A + +  I   V N+
Sbjct: 397 ASRSANAANDIRKLI--------------DASADKVQSGSQQVHAAGRTMEDIVAQVKNV 442

Query: 457 TDMTTQIATATEEQSAVAEEINRNIATIASLADQTSDEARRSAVLSGELTDTAN 510
           T +  QI+ +T EQ+     + R +  +  +  + ++    SA +S  +   A+
Sbjct: 443 TQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRAS 496