Pairwise Alignments

Query, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 332 a.a., Positive regulator of L-idonate catabolism from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  191 bits (484), Expect = 3e-53
 Identities = 117/324 (36%), Positives = 181/324 (55%), Gaps = 4/324 (1%)

Query: 11  RPTLNEVAKLAGVSPITASRALRGISTVAPELVEKVRAAAQSLGYVANPAARALASSCSQ 70
           R +L ++A LAGV+ +T SR +R    VA E  E++    + + Y+ N A   L ++ S 
Sbjct: 5   RISLQDIATLAGVTKMTVSRYIRSPKKVARETGERIAQIMEEINYIPNRAPAMLLNAQSY 64

Query: 71  TVVVLVPSLSNQLFIETLEAIQDVLRVRGLDVLIGNYHYSPEEEEKLLRNHLVNRPRGIL 130
           T+ VL+PS  NQLF + L  I+ V        LI NY+Y+ + EE+ + N L     GI+
Sbjct: 65  TLGVLIPSFQNQLFADILAGIESVTSGHNYQTLIANYNYNRDSEEESVINLLSYNIDGII 124

Query: 131 LTGFDHTAASRQMLETSGIPCVHMMELDTRLGAYCVGFSQQQAGAEAAHHLLG-RGRRRL 189
           L+   HT  + + L ++ +P V +M++        VGF  +QA  +    +L  R RR++
Sbjct: 125 LSEKYHTLRTVKFLRSATLPIVELMDIQGDRLDMEVGFDNRQAAFDMVSTMLDKRQRRKI 184

Query: 190 AYMAAQLDPRVLQRGEGFRRVLESAGLFDPALQVSTRQASSIGLGGELFARLLDQHPDVD 249
            Y+ ++ D R  QR  G+   +   GL    L+++ R  SSI LG +L    L  HPDVD
Sbjct: 185 LYLGSKDDIRDEQRYHGYCDAMTRRGL--APLRINPRAISSIHLGIQLMRDALTAHPDVD 242

Query: 250 GVFFCNDDLAQGAALEALRLGVAIPERVSLVGFNDLPGSAHMVPRLTSIRTPREEVGQRA 309
           GVF  NDD+A GA L      +A+PE++S+ GF+ L     M+P L S+ TPR E+G+RA
Sbjct: 243 GVFCTNDDIAMGALLWCRERQLAVPEQISIAGFHGLEMGRQMIPSLASVITPRFEIGRRA 302

Query: 310 AQVLLG-LLDGISQHPQVDLGFEL 332
           AQ+LL  + +    H  +DLG+++
Sbjct: 303 AQMLLNKIKNNDLNHNTIDLGYQI 326