Pairwise Alignments

Query, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 331 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  207 bits (528), Expect = 2e-58
 Identities = 121/323 (37%), Positives = 184/323 (56%), Gaps = 3/323 (0%)

Query: 11  RPTLNEVAKLAGVSPITASRALRGISTVAPELVEKVRAAAQSLGYVANPAARALASSCSQ 70
           RP L +VA   GV+ +T SR LR    V+  L  K+ AA   LGY+ N A   L+++ S+
Sbjct: 5   RPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSNATSR 64

Query: 71  TVVVLVPSLSNQLFIETLEAIQDVLRVRGLDVLIGNYHYSPEEEEKLLRNHLVNRPRGIL 130
            + VL+PSL+NQ+F E L  I+ V    G   ++ +Y Y PE E++ L + L     G++
Sbjct: 65  AIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLI 124

Query: 131 LTGFDHTAASRQMLETSGIPCVHMMELDTRLGAYCVGFSQQQAGAEAAHHLLGRGRRRLA 190
           LT   HT  + +M+E +GIP V +M+  +      VGF   +A  +    ++ RG R +A
Sbjct: 125 LTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGHRHIA 184

Query: 191 YMAAQLDPRVLQRGEGFRRVLESAGLFDPALQVSTRQASSIGLGGELFARLLDQHPDVDG 250
           Y+ A+LD R + + +G+ + +  AGL   ++ V   Q+SS   G EL  +   ++P +DG
Sbjct: 185 YLGARLDERTIIKQKGYEQAMLDAGLVPYSVMV--EQSSSYSSGIELIRQARREYPQLDG 242

Query: 251 VFFCNDDLAQGAALEALRLGVAIPERVSLVGFNDLPGSAHMVPRLTSIRTPREEVGQRAA 310
           VF  NDDLA GAA E  RLG+ +P+ +++ GF+       M PRL S+ TPRE +G   A
Sbjct: 243 VFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGA 302

Query: 311 QVLLGLLDGISQHPQ-VDLGFEL 332
           + LL  + G S  P+ +DLGF L
Sbjct: 303 ERLLARIRGESVTPKMLDLGFTL 325