Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 328 a.a., L-arabinose ABC transporter permease AraH from Pectobacterium carotovorum WPP14

 Score =  387 bits (993), Expect = e-112
 Identities = 200/318 (62%), Positives = 244/318 (76%)

Query: 11  TESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIA 70
           T ++ +  + GM L R  D++ ML+    +FL CA+F+ NF S +NM+GLGLAIS  G+ 
Sbjct: 5   TSATSEKKKNGMGLSRIWDNYGMLVVFAVLFLGCAIFVPNFASFINMKGLGLAISMSGMV 64

Query: 71  ACTMLFCLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVI 130
           AC MLFCLASG FDLSV S++AC+GV  ++VI  ++S+++GVSA L LG+  GL+NG VI
Sbjct: 65  ACGMLFCLASGDFDLSVASIIACAGVATAVVINISESLWIGVSAGLLLGVAFGLLNGFVI 124

Query: 131 AKLRINALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVPVPILITIACF 190
           A+L+INALITTLATMQI RGLAYI S+GKAVG+ +E FF  G     G+P PI ITI C 
Sbjct: 125 ARLKINALITTLATMQIARGLAYIISDGKAVGIEDERFFELGYANWLGLPAPIWITIGCM 184

Query: 191 IFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMT 250
           I FG LLN TT+GRNT+AIGGN+EAA LAGV V RTKIIIFA+ GLV A AG++LASRMT
Sbjct: 185 ILFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFALSGLVSAAAGIILASRMT 244

Query: 251 SGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQY 310
           SGQPM   G+EL +ISACVLGGVSL GGIG I +V+AGVLIL  +ENAMNL NI  F QY
Sbjct: 245 SGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGVLILGTVENAMNLLNISPFAQY 304

Query: 311 VIRGTILLLAVIIDRMKR 328
           V+RG ILL AVI DR K+
Sbjct: 305 VVRGLILLAAVIFDRYKQ 322