Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 321 a.a., Ribose import permease protein RbsC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  211 bits (536), Expect = 3e-59
 Identities = 112/312 (35%), Positives = 186/312 (59%), Gaps = 8/312 (2%)

Query: 25  RRFADDWVM----LLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLFCLAS 80
           R F   W+M    L+A + +  + +    NF +  N+  +    S   I A  M   + +
Sbjct: 10  RYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILT 69

Query: 81  GHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALIT 140
              DLSVGS+LA +G +A+ ++    +  + V+AALALG  +G + G+++AK R+ A I 
Sbjct: 70  SGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIA 129

Query: 141 TLATMQIVRGLAYIFSNGKAVGVS---NEDFF-IFGNGQVYGVPVPILITIACFIFFGWL 196
           TL  M ++RG+  +++NG  V      N D F  FG G+  GVP P+ I    F+   ++
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYM 189

Query: 197 LNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMTSGQPMI 256
           L++T  GR   A+GGN+ A  L+G++V++ KII++++ GL+ +LAG++  +R++S QP  
Sbjct: 190 LHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTA 249

Query: 257 GQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTI 316
           G G+EL  I+A VLGG SL+GG G I   + G LIL  + N +NL  + ++YQ +++  +
Sbjct: 250 GTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVV 309

Query: 317 LLLAVIIDRMKR 328
           +LLAV++D  K+
Sbjct: 310 ILLAVLVDNKKQ 321