Pairwise Alignments

Query, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 328 a.a., L-arabinose ABC transporter permease AraH from Dickeya dianthicola 67-19

 Score =  383 bits (984), Expect = e-111
 Identities = 200/322 (62%), Positives = 245/322 (76%), Gaps = 2/322 (0%)

Query: 9   MSTESSLQAPR--QGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAIST 66
           MST SS    R  QG++L R  D++ ML+    +FL C +F+ NF + +NM+GLGLAIS 
Sbjct: 1   MSTVSSPSHARKSQGLSLSRIWDNYGMLVVFAALFLACMLFVPNFATFVNMKGLGLAISM 60

Query: 67  VGIAACTMLFCLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLIN 126
            G+ AC MLFCLASG FDLSV SV+AC+GV  ++VI  ++S++LGV A L LG+  GL+N
Sbjct: 61  SGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINVSESLWLGVGAGLLLGVAFGLLN 120

Query: 127 GIVIAKLRINALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVPVPILIT 186
           G VIA+L+INALITTLATMQIVRGLAYI S+GKAVG+ +E FF  G     G+P PI +T
Sbjct: 121 GFVIAQLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWLT 180

Query: 187 IACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLA 246
           + C + FG LLN TT+GRNT+AIGGN+EAA LAGV V RTKIIIF + GLV A AG++LA
Sbjct: 181 VICMVLFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFGLSGLVSAAAGIILA 240

Query: 247 SRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDT 306
           SRMTSGQPM   G+EL +ISACVLGGVSL GGIG I +V+AGVLIL  +ENAMNL NI  
Sbjct: 241 SRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGVLILGTVENAMNLLNISP 300

Query: 307 FYQYVIRGTILLLAVIIDRMKR 328
           F QYV+RG ILL AV+ DR K+
Sbjct: 301 FAQYVVRGLILLAAVVFDRYKQ 322