Pairwise Alignments

Query, 302 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 289 a.a., ABC transporter permease from Fusobacterium nucleatum SB010

 Score =  215 bits (548), Expect = 8e-61
 Identities = 117/287 (40%), Positives = 184/287 (64%), Gaps = 11/287 (3%)

Query: 12  NDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYA--QDVMLRMK 69
           N  Q     V+R L+ +   R   +G ++L+I++L ALFA  +A YD     Q++  R+ 
Sbjct: 6   NKKQSQWAEVFRMLKKN---RMAMLGLIILVILVLLALFADVIANYDAVVIKQNLAERLM 62

Query: 70  PPVWMANGTWDYVLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFG 129
           PP    NG  ++ LGTD+ GRD  +RL++GAR+SL +G  A  IS I+G I+G ++GYFG
Sbjct: 63  PP----NG--EHWLGTDEFGRDIFARLIHGARVSLKVGILAISISVIVGGILGAISGYFG 116

Query: 130 GKTDALISYLITTRLAMPVVMIALASASLIGGSLKVVIVLLGCLLWDRFAVVVRAAVQQI 189
           G  D +I  ++   LA+P +++A+A  S +G S+  +++ +       FA +VRA+V  I
Sbjct: 117 GVIDNIIMRIVDIFLAVPSILLAIAIVSALGPSMLNLMISISVSYVPNFARIVRASVLSI 176

Query: 190 RDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPP 249
           RD E++ +A+A+G S  RI+   I+PN +  +IV  TL +A AIL  + LSF+G+G+QPP
Sbjct: 177 RDQEFIEAAKAIGASNSRIIMKHIIPNSLAPVIVQGTLGVAGAILSTAGLSFIGLGIQPP 236

Query: 250 IPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLI 296
            P WG M++ G+ Y+ ++ WV   PGVA+M+ +L +NL+GDGLRD +
Sbjct: 237 APEWGSMLSGGRQYLRYAWWVTTFPGVAIMITILSLNLLGDGLRDAL 283