Pairwise Alignments

Query, 289 a.a., protease FtsH subunit HflC from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 312 a.a., protease modulator HflC from Rhizobium sp. OAE497

 Score =  187 bits (475), Expect = 3e-52
 Identities = 105/290 (36%), Positives = 168/290 (57%), Gaps = 5/290 (1%)

Query: 2   SNKSLITLIVGVVLAVIAWNSFYIVSQTERAVLLQFGRVVQADVQPGLHVKVPYV----N 57
           SNK    LI   V+  + ++S ++V+  E+A++++FG++     +PGL+ K+P+     +
Sbjct: 3   SNKLPAVLIALAVVLFVVYSSVFVVNAREQAIVVRFGQIQSVKTEPGLYFKLPFAFMDAD 62

Query: 58  QVRKFDGRLLTLDAPTQRFLTLEKKAVMVDAYAKWRVKDAERFYTATSGLKQIADERLSR 117
           +V+  + + L LD    R    + +   VDA+  + + D  RF    SG ++ A+ RL  
Sbjct: 63  RVQYVEKQALRLDLDNIRVQVQDGQTFDVDAFVIYNIADVRRFRETVSGDREAAEARLRA 122

Query: 118 RLESGLRDQFGKRTLHEVVSGERDALMADITGSLNRMAEKELGIEVVDVRVKAIDLPKEV 177
           +L+S LR  +G R  +  +S ER A+M +I   L R+  + LG+ + DVR++  DL  EV
Sbjct: 123 QLDSSLRRVYGLRDYNAALSEERVAMMLEIRDDL-RIDAENLGLNIDDVRIRRTDLSPEV 181

Query: 178 NRSVFERMSTEREREAREHRAKGNELAEGIRADADRQRRVLLAEAYRESEEARGDGDAQA 237
             + +  M +ER  EA   RA GNE  +  RA ADRQ   + AEA R+SE  RG GDA  
Sbjct: 182 APNTYNAMRSERLAEAERIRASGNEEGQRRRAVADRQVVEITAEAQRDSEILRGQGDADR 241

Query: 238 AAIYSKAYGQDQEFYAFYRSLRAYRESFANKSDVMVLDPNSEFFRYMEKA 287
             I+++++G+D  F+ FYRS+ AY  S +++   +VL PNSEFFRY + A
Sbjct: 242 NRIFAESFGKDPSFFEFYRSMSAYSSSLSSQDTTLVLSPNSEFFRYFDNA 291