Pairwise Alignments

Query, 239 a.a., 16S rRNA m(3)U-1498 methyltransferase from Pseudomonas syringae pv. syringae B728a ΔmexB

Subject, 239 a.a., Ribosomal RNA small subunit methyltransferase E from Acinetobacter radioresistens SK82

 Score =  190 bits (483), Expect = 2e-53
 Identities = 105/231 (45%), Positives = 141/231 (61%), Gaps = 2/231 (0%)

Query: 3   LSRFFTETPLSLGEH-ELPEAQAHYISRVLRMTEGDALQLFDGSGQEFRGTLLEVGKKRV 61
           + RF+ E  L++G   EL E   H+  +VLR   GD+  LF+G G EF   L E+ KK  
Sbjct: 1   MPRFYIEADLTVGTTVELTETVFHHWVKVLRAQIGDSATLFNGRGGEFEANLTEISKKTA 60

Query: 62  HVQLTESFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIVSERCEVRLKDE 121
            V +  S            LGQ +S+G+RMD+ IQKATELGV+ I  + SERCE+RLK +
Sbjct: 61  SVAIRSSNPADRTPPFTTVLGQVMSKGDRMDYVIQKATELGVTTIQLLTSERCEMRLKYD 120

Query: 122 RAEKRQAHWQQIAISACEQCGRSVVPVIHAPMPLAEWIKHTEADLKLVLHP-VAEPLTSH 180
           R +K+  HWQ + I+ACEQCG + +P I  P+PL +W++      +LVL P   +     
Sbjct: 121 RDQKKLDHWQAVVIAACEQCGMNRIPEILPPVPLTDWLQQNLPATRLVLAPNKRQQNVLT 180

Query: 181 DKPASLAFLIGPEGGLNDAEVTQAQDAGFHAARLGPRVLRTETAPVVALSV 231
           D    LA LIGPEGGL++AE+  A  AGF    +G R+LRTETAPVVALS+
Sbjct: 181 DAQTDLALLIGPEGGLSEAEIDMANHAGFKNWCIGERILRTETAPVVALSI 231