Pairwise Alignments

Query, 764 a.a., AAA family ATPase Cdc48 from Sphingobium sp. HT1-2

Subject, 631 a.a., ATP-dependent zinc metalloprotease FtsH from Acinetobacter radioresistens SK82

 Score =  199 bits (507), Expect = 3e-55
 Identities = 106/228 (46%), Positives = 150/228 (65%), Gaps = 4/228 (1%)

Query: 204 VTYDDVGGMAETIDQLREMVELPLRYPELFERLGVDPPKGVMLHGPPGTGKTRLARAVAN 263
           VT+ DV G  E   ++ E+V+  L+ P  F+RLG   PKGV++ GPPGTGKT LA+A+A 
Sbjct: 154 VTFADVAGCDEAKQEVVEIVDF-LKDPAKFKRLGATIPKGVLMVGPPGTGKTLLAKAIAG 212

Query: 264 ESEAEFFLINGPEIMGSAYGESEKKLRDIFEEAAKAAPSILFIDEIDSIAPKRGQVTG-- 321
           E++  FF I+G + +    G    ++RD+FE+A + AP I+FIDEID++   RG  TG  
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGG 272

Query: 322 -ETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGR 380
            +  ++ + Q+L  MDG E    ++VIAATNR + +D+AL RPGRFDR+++VG+PD +GR
Sbjct: 273 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRADVLDKALLRPGRFDRQVMVGLPDIKGR 332

Query: 381 REILGIHTRGMPLGDRVDLAELARMTYGFVGADLAALTREAAIETVRR 428
            +IL +H R +P    VD+  LAR T GF GA LA L  EAA+   RR
Sbjct: 333 EQILNVHLRKLPSTTGVDVKVLARGTPGFSGAQLANLVNEAALFAARR 380



 Score =  189 bits (479), Expect = 5e-52
 Identities = 114/286 (39%), Positives = 166/286 (58%), Gaps = 14/286 (4%)

Query: 477 IGWADIGGLDDAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAR 536
           + +AD+ G D+A+  + E V+  LKDP  F+RLG    KG L+ GPPGTGKTLLAKA+A 
Sbjct: 154 VTFADVAGCDEAKQEVVEIVDF-LKDPAKFKRLGATIPKGVLMVGPPGTGKTLLAKAIAG 212

Query: 537 EAQANFIATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEP 596
           EA+  F +   SD +  + G    ++  +F +A++ AP +IFIDE+D++   RG G G  
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGG 272

Query: 597 A-VTERVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELIYVPVPDQAGR 655
               E+ +N +L EMDG E  + ++VI ATNR  ++D ALLRPGRFD  + V +PD  GR
Sbjct: 273 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRADVLDKALLRPGRFDRQVMVGLPDIKGR 332

Query: 656 KRILAIHTKKMPLASDVDLDQLAARTERFTGADLEDLSRRAGLIALRQSLQVEAVTMAHF 715
           ++IL +H +K+P  + VD+  LA  T  F+GA L +L   A L A R++     V M  F
Sbjct: 333 EQILNVHLRKLPSTTGVDVKVLARGTPGFSGAQLANLVNEAALFAARRN--KNTVDMHDF 390

Query: 716 EAALE------ETRASVTPEMERE----YEQIQATLKQSAMQVDPI 751
           E A +      E ++ V  E ER     +E   A + +     DP+
Sbjct: 391 EDAKDKLYMGPERKSMVLREEERRATAYHEAGHAIVAEMLPGTDPV 436