Pairwise Alignments

Query, 449 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 435 a.a., glucarate transporter from Pseudomonas simiae WCS417

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 29/311 (9%)

Query: 11  ASAVTPPEALPSMAYRAYFLLLMVLVSASVQG-ERYLMVVMVEPIRHELGLSDAAIGMAK 69
           AS VTP         + +F+++++ ++  +   +R  + +    +  ELG+    +G+  
Sbjct: 10  ASLVTPTR-------KRFFIMVLLFITVVINYLDRSNLSIAAPALTSELGIDPVHVGLIF 62

Query: 70  DMIIAIVYILAIIPLARLADGWSKRKIVAIAATVWSAAVIVCGLAKSFWILLIGRAGIGL 129
                  Y    IP   L D    R +   A  +WS A ++ G A SF  L + R  +G 
Sbjct: 63  SAF-GWTYAAMQIPGGWLVDRVPPRILYTAALLLWSIATVMLGFAASFIALFVLRMAVGA 121

Query: 130 GEGGFTPPSQAWIADLFPIRQRATALSIFLLGASLG-TFLGPAVGGWAVQAYGWRETLIF 188
            E    P +   +   FP R+RATA+ ++  G  +G  FL P +  W   A+GW    + 
Sbjct: 122 LEAPAYPINSRVVTTWFPERERATAIGVYTSGQFVGLAFLTPVL-AWLQHAFGWHMVFVA 180

Query: 189 ASIPGFILAPIVWFTLRDSR----------------SGLADGASAEQARPVPFLQTAREL 232
               G + A I +   R+ +                 GL D        P  ++     L
Sbjct: 181 TGGVGIVWAVIWYAVYREPKEFKGANTAEIDLIREGGGLVDMQEKAAKAPFSWVDLGIVL 240

Query: 233 LAIRTLPPLIAAASLNALLTMGFISWAPAFMERTHGMPASQAGLQMGGALFFGSAIGHTL 292
              +     +    LN+ L   F++W P ++ +  GM   ++GL +    F  + +G   
Sbjct: 241 SKRKLWGIYLGQFCLNSTLWF-FLTWFPTYLVKYRGMDFIKSGL-LASLPFLAAFVGVLC 298

Query: 293 GGPLADYLGRR 303
            G  +D+L RR
Sbjct: 299 SGIFSDWLIRR 309



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 319 ATAIGWMILT---GPGDRVFPLYGLNMLLGGLSAA--PLMA-VVAGLVPSRSRATAIAVL 372
           A  + W I T   G       L+ L M +G L A   P+ + VV    P R RATAI V 
Sbjct: 91  AALLLWSIATVMLGFAASFIALFVLRMAVGALEAPAYPINSRVVTTWFPERERATAIGV- 149

Query: 373 MVSIQVVGL 381
             S Q VGL
Sbjct: 150 YTSGQFVGL 158