Pairwise Alignments

Query, 560 a.a., Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site from Sphingobium sp. HT1-2

Subject, 594 a.a., GMC family oxidoreductase from Pseudomonas simiae WCS417

 Score =  121 bits (304), Expect = 7e-32
 Identities = 145/601 (24%), Positives = 236/601 (39%), Gaps = 85/601 (14%)

Query: 6   RYDAIVIGSGISGGWAAKELTEKGLRVLMLDRGHMVEHGEDYTYDGKPAYEVPARNIMPD 65
           + DA+++G G +G   AKELTE GL V+ L+RG M +   D  Y              P 
Sbjct: 7   KVDAVIVGFGWTGAIMAKELTEAGLNVVALERGPMQDTYPDGNY--------------PQ 52

Query: 66  PLKQSDYFIAQHGYVAPSNQAFYNNDRLNPYDYGAGSKFYWIRPAAVGGKSLIWGRWSFR 125
            + +  Y + +  +   S +       +N           ++    VGG  L W    FR
Sbjct: 53  VIDELTYSVRKKLFQDISKETVTIRHSVNDVALPNRQLGAFLPGNGVGGAGLHWSGVHFR 112

Query: 126 WSPAD--FEANKREGIG----------GDWPIRYEDLVPWYSYVEKYIGVSG-------- 165
             P +    ++  E  G           D+ + YE+L P++ Y EK  G SG        
Sbjct: 113 VDPIELRMRSHYEERYGKHFIPKDMTIQDFGVSYEELEPFFDYAEKVFGTSGQAWTVKGQ 172

Query: 166 ----SRENLAYLPDSEFQPPMPMN------IAEKWMKQRLETQFPGRKMINARLSNMTED 215
                R    Y PD     P P+        A+ + K   E  +    + +A  S    +
Sbjct: 173 LVGEGRGGNPYAPDR--SNPFPLESQKNTVSAQLFQKAAAEVGYKPYNLPSANTSGPYTN 230

Query: 216 KPEQNRTKCQLRNQC-GNGCSFGAYFSTQAVTLPAARATGRLTLRSDAVVTNLDYDPATK 274
                   C     C G  C   +  S     LPA R      LR ++ V  ++ D    
Sbjct: 231 PYGAQMGPCNFCGFCSGYVCYMYSKASPNVNILPALRQVPNFELRPNSHVLKVNLDSTKS 290

Query: 275 KVSSVRFVDAKTGQAETVTARLVFLCASALASTQILMNSRPAGSGKSH--FDSSGTLGR- 331
           K + V ++DA+  + E   A LV L A    + ++++ S   G GK +    + G +GR 
Sbjct: 291 KATGVTYIDAQGRECEQ-PAELVILGAFQFHNVRLMLLS---GIGKPYDPITNEGVVGRN 346

Query: 332 YVMDHIFRVGVKGD-IPGMEEFIEYGRRPGAIYVPRFRNNGDSEDVGFKRGYGYQGGA-- 388
           +   ++  +    D       FI  G     + +  F  N D+ D G    +G+ GG+  
Sbjct: 347 FAYQNMATIKAFFDKDTHTNNFI--GAGGNGVAIDDF--NADNFDHG---PHGFVGGSPM 399

Query: 389 --YREPSKPV----------GFGASMKQGMRKYGGWKFQMGAFGECLPYEDNYVALSPDK 436
              +  S+P+           +G++ K+    Y   +  M A G    Y  NY+ L P  
Sbjct: 400 WVNQAGSRPIAGTSNPPGTPAWGSAWKRATADYYTHQVSMDAHGAHQSYRGNYLDLDPVY 459

Query: 437 TDRFGMPLMQFNVTFRDNEMRM---MADAREQGEKMLRAAGLTNVTSSVREH---VPGDA 490
            D +G PL++    +++N+++M   M +   +  + +    +  +   V EH        
Sbjct: 460 RDAYGQPLLRMTFDWQENDIKMNRFMVEKMGKVAEAMNPKAIAVLGKKVGEHFNTASYQT 519

Query: 491 IHEMGGARMGADPRASVLNQWSQAHDASNLFVTDGAQMASISCVNPSLTFMALT---ARA 547
            H  GGA MG DP+ S LN++ Q  D  N+FV   +        NP+    ALT   ARA
Sbjct: 520 THLNGGAIMGTDPKTSALNRYLQCWDVHNVFVPGASAFPQGLGYNPTGLVAALTYWSARA 579

Query: 548 V 548
           +
Sbjct: 580 I 580