Pairwise Alignments

Query, 560 a.a., Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site from Sphingobium sp. HT1-2

Subject, 594 a.a., gluconate 2-dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 5e-35
 Identities = 145/604 (24%), Positives = 244/604 (40%), Gaps = 89/604 (14%)

Query: 5   DRYDAIVIGSGISGGWAAKELTEKGLRVLMLDRGHMVEHGEDYTYDGKPAYEVPARNIMP 64
           ++ DA+++G G +G   AKELTE GL V+ L+RG M +   + +Y              P
Sbjct: 6   NKVDAVIVGFGWAGAIMAKELTEAGLHVVALERGPMQDTYPEGSY--------------P 51

Query: 65  DPLKQSDYFIAQHGYVAPSNQAFYNNDRLNPYDYGAGSKFYWIRPAAVGGKSLIWGRWSF 124
             + +  Y + +  +V  S +       +N           ++    VGG  L W    F
Sbjct: 52  QVIDELTYSVRKKLFVDVSKETVTVRHSVNDVALPNRQLGAFLPGKGVGGAGLHWSGVHF 111

Query: 125 RWSPADFEANKR-----------EGIG-GDWPIRYEDLVPWYSYVEKYIGVSG------- 165
           R  P +                 EG+   D+ + YE+L P++ + EK  G SG       
Sbjct: 112 RVDPVELRLRSHYEERYGRTFIPEGMTIQDFGVSYEELEPYFDFAEKVFGTSGQAWTVKG 171

Query: 166 -----SRENLAYLPD--SEFQPPMPMNIAEKWMKQRLETQFPGRKMINARLSNMTEDKPE 218
                 +    Y PD  + F  P   N+    + ++  T   G K  N   +N +     
Sbjct: 172 QVVGEGKGGNPYAPDRSNPFPLPAQKNVVSARLFEKAATSL-GYKPYNLPSANTSGPYTN 230

Query: 219 QNRTKCQLRNQCGNGCSFGAYFSTQAV----TLPAARATGRLTLRSDAVVTNLDYDPATK 274
               +    N CG    +  Y  ++A      LPA R      LR +A V  ++ D + +
Sbjct: 231 PYGAQMGPCNFCGFCSGYVCYMYSKASPNVNILPALRQVPNFELRPNAHVLRVNLDDSKR 290

Query: 275 KVSSVRFVDAKTGQAETVTARLVFLCASALASTQILMNSRPAGSGKSH--FDSSGTLGRY 332
           + + V ++DA+  + E   A LV L A    + ++++ S   G GK +    + G +GR 
Sbjct: 291 RATGVTYIDAQGREVEQ-PAELVILAAFQFNNVRLMLLS---GIGKPYDPVKNEGVVGRN 346

Query: 333 VMDHIFRVGVKGDIPGMEEFIEY-----GRRPGAIYVPRFRNNGDSEDVGFKRGYGYQGG 387
                F     G +    +   Y     G     I +  F  N D+ D G    +G+ GG
Sbjct: 347 -----FAYQNMGTVKAFFDKDTYTNNFIGAGGNGIAIDDF--NADNFDHG---PHGFVGG 396

Query: 388 A----YREPSKPV----------GFGASMKQGMRKYGGWKFQMGAFGECLPYEDNYVALS 433
           +     +  S+P+           +G++ K+    Y   +  M A G    Y  NY+ L 
Sbjct: 397 SPMWVNQAGSRPIAGTSNPPGTPAWGSAWKKATADYYTHQVSMDAHGAHQSYRGNYLDLD 456

Query: 434 PDKTDRFGMPLMQFNVTFRDNEMRM---MADAREQGEKMLRAAGLTNVTSSVREH---VP 487
           P   D +G PL++    +++N+++M   M D   +  + +    +  +   V++H     
Sbjct: 457 PTYRDAYGQPLLRMTFDWQENDIKMNQFMVDKLSKIAQAMNPKAIAVLGKQVKDHFNTTS 516

Query: 488 GDAIHEMGGARMGADPRASVLNQWSQAHDASNLFVTDGAQMASISCVNPSLTFMALT--- 544
               H  GGA MG DP+ S LN++ Q+ D  N+FV   +        NP+    ALT   
Sbjct: 517 YQTTHLNGGAIMGTDPKTSALNRYLQSWDVHNVFVPGASAFPQGLGYNPTGLVAALTYWS 576

Query: 545 ARAV 548
           ARA+
Sbjct: 577 ARAI 580