Pairwise Alignments

Query, 234 a.a., Mobile element protein from Sphingobium sp. HT1-2

Subject, 512 a.a., IS3 family transposase from Agrobacterium fabrum C58

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 38/243 (15%)

Query: 5   IDAHREDLGVEPICRELAIAPSSYHEHALRLADPGRRPARARRDEEMRGQIKRVHEANYG 64
           IDA +E   +  +  +L IA SSY  H  R+    +  A       +R  +  + EAN  
Sbjct: 230 IDALKEVYRLPELLAQLRIARSSYFYHRARMCLADKYAA-------VRLSLAEIFEANRR 282

Query: 65  VYGSRKVWHQLRHEGVTVAKCTVERLMRVMGLSGVRRGKRTITTVSNPKAPCPLDKVNRE 124
            YG R++   L  + V V++  V+RLM+   L+  R  +R   +     +P P + +NR+
Sbjct: 283 CYGYRRLQASLARKSVIVSEKVVQRLMKQEHLAVARPRRRRFGSYLGEISPAPENLINRD 342

Query: 125 FRVARP------------------------------IVGWKVSASATAGFVLDALEQAIH 154
           F    P                              ++ W +     AG V   L+ AI 
Sbjct: 343 FHADAPNVKWLTDITEFQIPAGKVYLSPIIDCFDGMVISWSIGTQPDAGLVNTMLDAAIG 402

Query: 155 ARRPGSDDGLVHHSDRGVQYLAMGYTQRLAEANLVPSVGSVGDSYDNALAETINGLYKAE 214
               G +  ++ HSDRG  Y   G+  R++EA LV S+   G S DNA  E   G  K E
Sbjct: 403 TVANGEERPII-HSDRGAHYRWPGWLTRISEARLVRSMSRKGCSQDNAACEGFFGRLKTE 461

Query: 215 VIW 217
           + +
Sbjct: 462 LFY 464