Pairwise Alignments

Query, 505 a.a., RNA polymerase sigma-54 factor RpoN from Sphingobium sp. HT1-2

Subject, 505 a.a., RNA polymerase sigma-54 factor RpoN from Sphingobium sp. HT1-2

 Score =  979 bits (2532), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MALGPRLDIRQSQSLVMTPQLQQAIKLLALSNLEIEAFVAGELEKNPLLEQGAADDGGRE 60
           MALGPRLDIRQSQSLVMTPQLQQAIKLLALSNLEIEAFVAGELEKNPLLEQGAADDGGRE
Sbjct: 1   MALGPRLDIRQSQSLVMTPQLQQAIKLLALSNLEIEAFVAGELEKNPLLEQGAADDGGRE 60

Query: 61  GSGVDREVEAPTLAAETGASDDLIAQGLGGADSPLDVDHGAETFIDDGPADRMGAGSGSG 120
           GSGVDREVEAPTLAAETGASDDLIAQGLGGADSPLDVDHGAETFIDDGPADRMGAGSGSG
Sbjct: 61  GSGVDREVEAPTLAAETGASDDLIAQGLGGADSPLDVDHGAETFIDDGPADRMGAGSGSG 120

Query: 121 SLDMLGGGSGSGEAVDFDSFANAAPSLQEHLMDQARSTLSGMDLLIATQLIGQISEAGYL 180
           SLDMLGGGSGSGEAVDFDSFANAAPSLQEHLMDQARSTLSGMDLLIATQLIGQISEAGYL
Sbjct: 121 SLDMLGGGSGSGEAVDFDSFANAAPSLQEHLMDQARSTLSGMDLLIATQLIGQISEAGYL 180

Query: 181 EANLLQTAHGLGVPLFTVEAVLEVIHSFDPTGVGARSLAECLALQAKEANRYDPCIQRLL 240
           EANLLQTAHGLGVPLFTVEAVLEVIHSFDPTGVGARSLAECLALQAKEANRYDPCIQRLL
Sbjct: 181 EANLLQTAHGLGVPLFTVEAVLEVIHSFDPTGVGARSLAECLALQAKEANRYDPCIQRLL 240

Query: 241 ANLDLLAKGALPQLRRICGVDEEDLADMIRELRGYDPKPGLRFASDSATPVTPDLFVSRT 300
           ANLDLLAKGALPQLRRICGVDEEDLADMIRELRGYDPKPGLRFASDSATPVTPDLFVSRT
Sbjct: 241 ANLDLLAKGALPQLRRICGVDEEDLADMIRELRGYDPKPGLRFASDSATPVTPDLFVSRT 300

Query: 301 REGWGIEVNSATLPRVLVNRTYYVELAGGPQDKASKAWLADCLASANWLVKALDQRQKTI 360
           REGWGIEVNSATLPRVLVNRTYYVELAGGPQDKASKAWLADCLASANWLVKALDQRQKTI
Sbjct: 301 REGWGIEVNSATLPRVLVNRTYYVELAGGPQDKASKAWLADCLASANWLVKALDQRQKTI 360

Query: 361 IKVASEIVRQQEDFFRNGVAYLKPLTLRAVADAIEMHESTVSRVTSNKYLSCPRGLYELK 420
           IKVASEIVRQQEDFFRNGVAYLKPLTLRAVADAIEMHESTVSRVTSNKYLSCPRGLYELK
Sbjct: 361 IKVASEIVRQQEDFFRNGVAYLKPLTLRAVADAIEMHESTVSRVTSNKYLSCPRGLYELK 420

Query: 421 YFFTSGVAAADGDGAVSAEAVKSHIKALIGAEEAHAILSDDTLVDLLRAKGMDIARRTVA 480
           YFFTSGVAAADGDGAVSAEAVKSHIKALIGAEEAHAILSDDTLVDLLRAKGMDIARRTVA
Sbjct: 421 YFFTSGVAAADGDGAVSAEAVKSHIKALIGAEEAHAILSDDTLVDLLRAKGMDIARRTVA 480

Query: 481 KYRESMGIGSSVQRRRQKALKGKAA 505
           KYRESMGIGSSVQRRRQKALKGKAA
Sbjct: 481 KYRESMGIGSSVQRRRQKALKGKAA 505