Pairwise Alignments

Query, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

Subject, 260 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  145 bits (366), Expect = 9e-40
 Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 9/242 (3%)

Query: 39  LSVISIAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILD 98
           L V  + KSY     +  VS TV  G+++ L+GPNGAGK+TCF  + G + PD G + ++
Sbjct: 5   LEVKDLMKSYGGVHAVRGVSFTVEAGQMLALIGPNGAGKSTCFNMLNGQIPPDAGTVRIE 64

Query: 99  GQDITGLPMYRRAILGLGYLPQETSIFRGLTVEQNI--------GAVLEMAEPNKAARAE 150
           G+DI GLP      LG+G   Q T+ F  +TV +N+        G +  +     AA  E
Sbjct: 65  GKDIKGLPPRAVWRLGVGRTFQITATFASMTVRENVQVALISFHGLISRVFGFAGAACRE 124

Query: 151 KLEQLLDEFGLTRLRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIADI 210
           + + LL   GLT         L+ G+ +R E+A ALA  P ++L+DEP AG+ P    ++
Sbjct: 125 EADALLALVGLTTQAQRPCGELAYGDLKRLELAVALANQPRLLLMDEPTAGMAPRERVEL 184

Query: 211 RDLVKQL-KTRGIGVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLYL 269
             L  ++ + +GIGVL T+H++    E  D   ++  GQ++  G+P E+   P VR +YL
Sbjct: 185 MRLTAEIARAKGIGVLFTEHDMDVVFEHADEVMVLNRGQLIARGTPAEVRRDPQVRAIYL 244

Query: 270 GE 271
           GE
Sbjct: 245 GE 246