Pairwise Alignments

Query, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

Subject, 236 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  149 bits (376), Expect = 5e-41
 Identities = 85/233 (36%), Positives = 133/233 (57%), Gaps = 2/233 (0%)

Query: 39  LSVISIAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILD 98
           LSV  I   Y    VLS+VS+ V +GE V +LGPNGAGK+T   ++ GL+ P  G I  D
Sbjct: 4   LSVEGIRSGYGSLQVLSEVSIEVAEGEAVAILGPNGAGKSTLLRTISGLITPTAGAISFD 63

Query: 99  GQDITGLPMYRRAILGLGYLPQETSIFRGLTVEQNIGAVLEMAEPNKAARAEKLEQLLDE 158
           G D+  +P +R    GL  +P+   IF  L+V +N+  V     P + AR   L+ +   
Sbjct: 64  GHDLLAMPAHRIPHAGLVQVPEARHIFPSLSVRENL-LVGGTPLPTRGAREAALDDIWRI 122

Query: 159 FG-LTRLRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIADIRDLVKQL 217
           F  L   RD+ A  LSGG+++   I RAL + P +V+LDEP  G+ PL + ++ ++++ L
Sbjct: 123 FPMLVTKRDAPAGTLSGGQQQMVAIGRALMSRPRLVMLDEPSLGLAPLVVRELYEVLRSL 182

Query: 218 KTRGIGVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLYLG 270
              G+ +L+ + +V   L +V RA ++ +G +  +G+ +EL     VR+ YLG
Sbjct: 183 VQSGLTLLLVEQDVPVALSLVSRAYVVENGSIALSGTASELRESDHVRQAYLG 235