Pairwise Alignments

Query, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

Subject, 250 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  145 bits (365), Expect = 1e-39
 Identities = 83/243 (34%), Positives = 138/243 (56%), Gaps = 10/243 (4%)

Query: 39  LSVISIAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILD 98
           + V  + +S+   V L+ +S    + +V  ++GPNGAGK+T F  + G+++P  G I   
Sbjct: 5   MEVTDVGRSFGGFVALAGISAKFERNKVTAVIGPNGAGKSTFFNVLSGVLQPSTGSIRFK 64

Query: 99  GQDITGLPMYRRAILGLGYLPQETSIFRGLTVEQNIGAVLEMAE---------PNKAARA 149
           GQ++ GL  +R A LG+    Q T++F  L+VE+N+    +  +               +
Sbjct: 65  GQELKGLKQHRFAHLGIARSYQITNLFPELSVEENVRVAAQALKTRYDVFSHRDRYPELS 124

Query: 150 EKLEQLLDEFGLTRLRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIAD 209
           +K E  L E GLT  R   A  L+ GE+R  EIA AL A+P ++LLDEP AG+ P    D
Sbjct: 125 QKAEAALGEVGLTHRRARRARDLAHGEQRALEIAIALVANPELLLLDEPTAGMGPEETKD 184

Query: 210 IRDLVKQLKTRGIGVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLYL 269
           +  L+++L      +L+ +H ++  L + DR  +++ G+++  G+PT + A P+VRR+YL
Sbjct: 185 MVALIERLAVDRT-ILLVEHKMKMILGLSDRILVLHHGRLIADGTPTAVQADPEVRRVYL 243

Query: 270 GEN 272
           G+N
Sbjct: 244 GQN 246