Pairwise Alignments

Query, 451 a.a., Carboxyl-terminal protease (EC 3.4.21.102) from Sphingobium sp. HT1-2

Subject, 704 a.a., Tail-specific protease prc from Pseudomonas putida KT2440

 Score =  140 bits (354), Expect = 1e-37
 Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 34/338 (10%)

Query: 57  EKLIKGAIDGMLASLDPHSSFLDARDFQNLRTQTEGSYGGLGLSVTQEDGAVKVIAPTQD 116
           E + +  I+    S DPH+++L   + +N       S  G+G  +  ++  VK++     
Sbjct: 221 EDIFQAYINTFAQSYDPHTNYLSPDNAENFDINMSLSLEGIGAVLQSDNDQVKIVRLVPA 280

Query: 117 TPAWRAG-IKAGDYITHI-----DGQLIYGGTLDEAVDKMRGAPGTSIKLTIVRTGRDKP 170
            PA +   +   D I  +     +   + G  LDE V  +RG  G+ ++L I+    + P
Sbjct: 281 GPAAKTKQVAPADKIIGVAQGNKEMVDVVGWRLDEVVKLIRGPKGSVVRLEIIPAS-NAP 339

Query: 171 IDLT-----LTREIIEIKP---------VKWEVKN-NIGVINIVSFSANTGA------DV 209
            D T     +TRE ++++          +K + ++  +G+I I +F  +  A      + 
Sbjct: 340 SDQTSKIVSITREAVKLEEQAAKKSVLKLKQDGRDYKLGIIEIPAFYLDFKAYRAGDPEY 399

Query: 210 RSAIRSIDKSLGH----KPTGYILDLRSNPGGLLDEAVSTSDVFLERGEIVSQRGRNKGD 265
           +S  R + K L      K  G ++DLR+N GG L EA   + +F+E+G  V  R  +   
Sbjct: 400 KSTTRDVKKLLTELQKEKVDGVVIDLRNNGGGSLQEATELTSLFIEKGPTVLVRNSDGRV 459

Query: 266 VERYYAKPGDDAKGLPVIVLVDAGSASASEIVAGALQDQHRALIMGERSFGKGSVQTMLP 325
                  PG   KG P+ +LV+  SASASEI AGA+QD HRALI+G ++FGKG+VQT+ P
Sbjct: 460 DVLEDENPGAFYKG-PLALLVNRLSASASEIFAGAMQDYHRALIIGGQTFGKGTVQTIQP 518

Query: 326 LSNTTALKLTTARYFTPSGRSVQEGGIQPDIKVPQLSD 363
           L N   LKLT A+++  SG+S Q  G+ PDI  P + D
Sbjct: 519 L-NHGELKLTLAKFYRVSGQSTQHQGVLPDIDYPSIID 555