Pairwise Alignments

Query, 327 a.a., Transcriptional regulator, AraC family from Sphingobium sp. HT1-2

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  118 bits (295), Expect = 2e-31
 Identities = 105/334 (31%), Positives = 149/334 (44%), Gaps = 39/334 (11%)

Query: 11  VGILLYPGCQQAMVHGMTDLIDIAG---------------QFSVQHGGPVVRVSHWQMQA 55
           +G+L++PG Q      + DL  IA                +   + GGPVV  S   + +
Sbjct: 4   IGVLVFPGFQ------ILDLAAIAAFELANMHLDQPVYCVEMLSETGGPVVSSSGVTVDS 57

Query: 56  DGCFARSHDTHEALAGTPDIWLVPGRLTGVPEAEEAAPYARWLLDRHAAGATLASNCGGA 115
               A   DT           ++ G LT  P +E+     R       +   +AS C GA
Sbjct: 58  KRYTAAKFDT----------LVMTGSLTITPTSEKLCQILR---SGRRSARRVASICTGA 104

Query: 116 FLLAATGLLDGRPATTHWWFADAFRTRFPAVKLDCDRIVIDDGDIITAGGLMAWTDLGMR 175
           F LA  GLLDGR  TTHW FA   +   P  K+  DRI I+D  + T+ G+ A  DL + 
Sbjct: 105 FGLADAGLLDGRRVTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLA 164

Query: 176 LVDRLLGPTVMLDTAKFLLI--DTAGREQKHFARFLPRLTHGDEPILKVQHWLAAREAKA 233
           LV+  LG  +    AK L++    AG + +  A  L  L    + I     +  A   + 
Sbjct: 165 LVEEDLGVDMARLIAKKLVVYHRRAGGQSQFSA--LLELEPKSDRIQLALAYARAHLREG 222

Query: 234 VSVTKMAAQAALEERTFQRRFKAATAMTPIEYVQHLRVAKAREHLEFTRRTIDQIAWSVG 293
           +SV ++A  A L  R F R FKA T  +P + V+ LRV  AR  ++  R  +  +A  VG
Sbjct: 223 LSVEELAEVAHLSPRQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVG 282

Query: 294 YEDAAAFRKLFHRLVGLSPGDYRSRFAAPSAQAA 327
           + D    R+ F R +G  P   R R A   A AA
Sbjct: 283 FGDPERMRRAFLRTLGQPPQSVR-RVARQQAMAA 315