Pairwise Alignments

Query, 405 a.a., Outer membrane protein romA from Sphingobium sp. HT1-2

Subject, 349 a.a., hydrolase from Pseudomonas simiae WCS417

 Score =  124 bits (312), Expect = 3e-33
 Identities = 97/320 (30%), Positives = 147/320 (45%), Gaps = 38/320 (11%)

Query: 41  PASRHYDGARFFNPDGEIDMPAPPGTSRQGFIARW-LLGNDDRPAWP-DAVAVKPARPAP 98
           PA+   D   F N     + P   G   +     W +L N  R   P   + V+P     
Sbjct: 12  PAAPKQDQGHFSN-----EAPVQQGGFGKTLRIFWNMLFNKPRSTRPVGQIPVQPLTHEQ 66

Query: 99  FAAPRGMVATWVGHATVLVQAAGINILTDPIWSDHASPFPPLGPKRVAEPGIRMKDLPRI 158
             A        +GH+TVL++  G   +TDP++++ ASPF   GPKR   P I +++LP +
Sbjct: 67  LLAAPDHSVFRLGHSTVLLKMRGKFWVTDPVFAERASPFSWAGPKRFHPPPISLEELPPL 126

Query: 159 DLIVISHNHYDHLDIPTLKALWQRDRPRIVTALGNDTILKANGIPSV---ALDWGQSVTG 215
           + +++SHNHYDHLD   +  L  + R   +  LG   IL   G+ +     LDW Q   G
Sbjct: 127 EAVILSHNHYDHLDRKAVVQLADKTR-YFLAPLGVGDILVKWGVDASKVRQLDWWQ---G 182

Query: 216 AQLNGLVPEAVIQCENYEHCPDYRVHATRNHHWSSRWFTDRNRALWSSFLIETRAGNIYF 275
            ++ G+                 R  AT   H+S R   D N+ LW S+++   A  I+F
Sbjct: 183 TEVEGI-----------------RFVATPAQHFSGRGLLDANQTLWCSWVMIDGARRIFF 225

Query: 276 AGDTGAGDMGWSGDATRFGPIRLALIPIGAFRF-WPGQMESDAHIGPRRAVELFERLGAS 334
           +GDTG  D G+     ++GP  L L+  GA+   WP       H+ P + ++    L   
Sbjct: 226 SGDTGYFD-GFKRIGEQYGPFDLTLMETGAYNVDWP-----HVHMQPEQTLQAHIDLKGR 279

Query: 335 TAIPIHWGTFRLSYEKRDTP 354
             +PIH GTF L++     P
Sbjct: 280 WLLPIHNGTFDLAFHAWHEP 299