Pairwise Alignments

Query, 917 a.a., DinG family ATP-dependent helicase YoaA from Sphingobium sp. HT1-2

Subject, 714 a.a., ATP-dependent helicase DinG/Rad3 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  101 bits (252), Expect = 1e-25
 Identities = 187/747 (25%), Positives = 292/747 (39%), Gaps = 103/747 (13%)

Query: 193 PGAEPRPGQRAYAAAAMEAFRPRTHRDQPNMLLAEAGTGIGKTLGYLAPASLWAAQAQGT 252
           P   PR  QR   A           R     L  EA TG+GKTL YL P    A + Q T
Sbjct: 23  PDFIPRAPQRQMIADVARTLAGEEGRH----LAIEAPTGVGKTLSYLIPGIAIAREEQKT 78

Query: 253 VWISTYTKALQRQLDRESL----RLFPDPATAARRVVVRKGRENYLCLLNLEDALQGGFA 308
           + +ST   ALQ Q+  + L    ++ PD      R     GR  Y+C  NL  AL     
Sbjct: 79  LVVSTANVALQDQIFSKDLPLLRKIIPD-----LRFTAAFGRGRYVCPRNLA-ALASSEP 132

Query: 309 GRAAILA----QLVARWAAFSKDGDMVGGDLPGWLPILFRRNGSTALTD--------RRG 356
            +  +LA    +L        K    + GDL G+     R +   A+ D         + 
Sbjct: 133 TQQDLLAFLDDELTPNNQEEQKRCARLKGDLDGYKWDGLRDHTDIAIDDDLWRRLSTDKA 192

Query: 357 ECIYAGCPHYRKCFIERSARASAEADIVIANHALVMINAARGRETGQRPQR--IVFDEGH 414
            C+   C +YR+C    + R   EA++V+ANHALVM  A         P+   +V DEGH
Sbjct: 193 SCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMA-AMESEAVLPEPKHLLLVLDEGH 251

Query: 415 HLFDAADSTFSVALSGQEAIELRRWVMGPEGGSRGRRRGLAARLSDLASYDEEGGEAIRT 474
           HL D A          ++A+E     M  E  +   R  L     DL S      + + T
Sbjct: 252 HLPDVA----------RDALE-----MSAEITASWYRLQL-----DLFS------KLVAT 285

Query: 475 AVEAARALPADDWLKRIVAGEPFGPLEELLATVRGTVFARAADSGEADAGYGLETELAEP 534
            +E  R                   + EL+A++   +      + EA+  + +       
Sbjct: 286 CMEQFRPKTTPPLANPERLNAHCEEVYELIASLNAILNLYMPAAQEAEHRFAM------- 338

Query: 535 DGPLVEAAQEAAIALDALLKPLVRLSKRLEAVLEDAPDWLDGAARARIEGAIGSLGWRRD 594
            G L +   E    L  L + L  L+   E+ L D  +        R+   I  +     
Sbjct: 339 -GELPDEVMEICQRLAKLTETLRGLA---ESFLNDLSEKTGSHDIVRLHRVILQMNRALG 394

Query: 595 LISAWLAL--LARIGGPADPDFVDWMTVDRVEGREYDIGLHRHWLDPTRPLAEAVLQPAQ 652
           +  A   L  LA +   +      W T +  EG +  +  H   +  +  L   + +   
Sbjct: 395 MFEAQSKLWRLASMAQSSGAPVSKWATREIREG-QLHVWFHCVGIRVSDQLERLLWRSVP 453

Query: 653 GVIVTSATLKGGGDWSNAEARSGVTHLSHSAERFEAA-SPFDYPGRAEVLI-------VT 704
            +IVTSATL+    +S  +  SG+     + +RF A  SPF++  + +++I         
Sbjct: 454 HIIVTSATLRSLNSFSRLQEMSGLK--EKAGDRFVALDSPFNHVEQGKLVIPQMRYEPTI 511

Query: 705 DIKRGDIAAMSGAYARLIEA-SGGGTLGLFTAIRRLRAVHARIADRLARAGLPLYAQHVD 763
           D +   IA M+  +   +E+    G L LF + R ++    R  + +A   L L  Q   
Sbjct: 512 DNEEQHIAEMAAYFREQLESKKHHGMLVLFASGRAMQ----RFLEHVADVRLLLLVQGDQ 567

Query: 764 PMDTGTLVDIFR----DDPRASLLGTDALRDGVDVPGHSLRLVVMEGV---PWSKPTVLH 816
           P     LV++ R       R+ L+G  +  +G+D+ G  L  V +  +   P   P V+ 
Sbjct: 568 P--RYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVIT 625

Query: 817 AARRLAG-GGSAYDDRLIRA---RLAQAFGRLIRRAEDKGSFVI-----LSAAMPSRLLS 867
               L       ++ + + +    L Q  GRLIR    +G  VI     L+     RLL+
Sbjct: 626 EGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLN 685

Query: 868 AFPPGTPIRRLTLDEAIIAVSAKMQAR 894
           A P   PI +  + + I+   AK   R
Sbjct: 686 ALPV-FPIEQPAVPDVIVKPKAKPARR 711