Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  267 bits (683), Expect = 8e-76
 Identities = 172/516 (33%), Positives = 282/516 (54%), Gaps = 14/516 (2%)

Query: 57  LLVVILA----LASALRFYFVSWLGERVVADIRSATQANLLRQAPAFFEENRPSEIASRM 112
           LL++++A    L S L  YF++ +   +V D+R A    LL     +F+ +    + SR+
Sbjct: 84  LLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRI 143

Query: 113 TADTAIIDQVVGSTVSVALRNLVTGIGGLIYLFVLAPKLAGLLILGIPVIVLTLVTLGRR 172
           T +  ++       + V +R  +T +    YL  +   L  +++  +PVI + +    ++
Sbjct: 144 TFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKK 203

Query: 173 VRKLSRASQDRLAEVGSVTTEVLGAMKIVQGFGQEGREAARFDATVANGFATARQRILLR 232
            RK S+  Q  + +V  V +E +   ++V+ FG E  E  RF     +      +     
Sbjct: 204 FRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTG 263

Query: 233 AVMTAIAFALVFGSITGVLWLGAIDVAAGRLSGGSIAAFVLTGGLVAGAFGSLSESWGDL 292
           ++ T +   +++ ++  +++L  +    G  + G + A++   GL+      LSE    +
Sbjct: 264 SLYTPMLQLVIYSAMAALMFL--VLFLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTI 321

Query: 293 LRG-AGAASRLDELMAAEPAIAAPAAPVAIPTLPQGARLRFDNVHFHYPTRPDQAALNGV 351
            +G AGA S  ++L  A            +       RL   N+ F YP   ++  L+ +
Sbjct: 322 QKGLAGAESIFEQLDEAPEVDTGTVEKERVE-----GRLEVRNLSFTYPGT-EREVLSDI 375

Query: 352 TIDIAPGETVAVVGPSGAGKSTLIQLALRFYDPDQGEVQLNDVPLPAADPAALRAAMAMV 411
           +    PG+ +A+VG SG+GKSTL  L  RFY  D+G++ L+ V +       LR  ++ V
Sbjct: 376 SFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQV 435

Query: 412 PQDSVIFAASARDNLRYGKW-DASDEEIWAAARAANAEAFLRALPQGLDSHLGEGGARLS 470
            Q   +F  +  +N+ YG    A   +I AAA  A A+ F+  LP+G D+ +GE G  LS
Sbjct: 436 TQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLS 495

Query: 471 GGQRQRVSIARALLRDAPILLLDEATSALDAESEQLVKDALDRLMQGRTTIVIAHRLATV 530
           GGQRQR++IARALL++AP+L+LDEATSALD ESE+ ++ ALD +MQGRTT+VIAHRL+T+
Sbjct: 496 GGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTI 555

Query: 531 RAADRIIVLDQGRIVEQGDHATLVALGGLYARLASL 566
             AD+I+V+DQGR+VE+G H  L+A  G YARL ++
Sbjct: 556 EKADQILVMDQGRLVERGTHTELLAANGHYARLHAM 591