Pairwise Alignments

Query, 335 a.a., DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2) from Sphingobium sp. HT1-2

Subject, 340 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  268 bits (686), Expect = 1e-76
 Identities = 129/289 (44%), Positives = 183/289 (63%), Gaps = 12/289 (4%)

Query: 11  DGMPGISRRVLKQGWAYRAADGSRITDRDEIDRLNAIAMPPAYRDCWFCPSPHGHIQATG 70
           D  PG++RR  +  + Y  ADG R+ D + + R+ A+ +PPAY D W C  P GH+QATG
Sbjct: 15  DSQPGLTRRRWRDRFIYLDADGQRVRDSETLARIAALVIPPAYTDVWICADPQGHLQATG 74

Query: 71  YDERGRKQYRYHPDFRAAREAEKYAGCPAFGRALPQLRARMEEDLSRRGLRKARTIAAVV 130
            D RGRKQYRYH  +R  R+  KY    AF +ALP+LR ++E  L+R GL + + +A VV
Sbjct: 75  RDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLARPGLDREKVMALVV 134

Query: 131 RLLDLAKLRVGNEHYATTNKSFGATTLRRRHVDLNGRSLTLRYRAKSGKEQQLSITDSRL 190
            LLD   +R+GN+ Y   N+S+G TTLR RHV + G ++  ++R K G E  +++ D RL
Sbjct: 135 SLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQVKGSTIRFQFRGKRGVEHNVTLNDRRL 194

Query: 191 LRFVRAVQDLPGQHLFQYLDEDGEAHPISSSDVNAYIAQAMGGDFTAKHFRTWGASTIAF 250
              ++   +LPGQ LFQYLDEDG+ H + SS+VN ++ Q  G DFTAK +RTW  S++A 
Sbjct: 195 ANLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFTAKDYRTWAGSSLAL 254

Query: 251 ----------ETLAARHVSLKEMIEPVAAALGNTPAISRKSYIHPALID 289
                     E+ A R V+   ++  VA  LGNTPA+ R+ YIHPA+++
Sbjct: 255 NLLKPLAWEPESEAKRQVA--AIVRQVATRLGNTPAVCRRCYIHPAVLE 301