Pairwise Alignments

Query, 426 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

Subject, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 1e-51
 Identities = 128/368 (34%), Positives = 193/368 (52%), Gaps = 16/368 (4%)

Query: 60  SAFLLDGPRRIALDVAGAQAGAS-GYAGSNAVVSGIRQGQLSDTMARIVLDLTTPATLGD 118
           S F L  P R+ +D+ GA   A    A SN  +S +R  Q + T  R+V+DL    T   
Sbjct: 52  SVFTLSAPDRLVIDINGATLAAPLNVATSNTPISSVRSAQRTPTDLRVVVDLKKSVT--- 108

Query: 119 PQIAADGKSLSFSLQNVTDGRFRTAVGQGRLRFDAPANMSARPQKRIHSITVPIPPVARG 178
           P+      +  +  + V D   + A     +   AP    A  Q    +  VP+ P    
Sbjct: 109 PKSFTLAPNAQYGNRLVVDLYDQEA---DAIAASAPPPAPAPVQTPATTPAVPVTPAQPA 165

Query: 179 VDLPAIEGVRDGSRPLVV-IDAGHGGHDPGAINKDNGKREKDVTLAIAQAIRDQLVKSGR 237
           + LP +     G R +VV IDAGHGG DPGA +   G+ EKD+ L IA+ ++ Q+     
Sbjct: 166 IKLPPVPS---GKRDIVVAIDAGHGGEDPGA-SGSRGQHEKDIVLQIAKELQRQINSEKG 221

Query: 238 VRVALTRDDDRFLVLQERYGIARKLGADLFISVHADSAENADAHGATVYTLSETASDREA 297
            R  LTR  D F+ L++R  IARK GADLFIS+HAD+A +  A GA+V+ LS+  +  E 
Sbjct: 222 FRAELTRTGDYFIPLRKRTEIARKKGADLFISIHADAAPSRAAFGASVFALSDRGATSET 281

Query: 298 AR-LAARENKADVLNG---VNLGNQSGDVSSILIDLTQRESMNISANFARLLQREAAPYV 353
           AR LA  EN++D++ G   V+L ++   ++ +L+DL+   +++ S N  + +        
Sbjct: 282 ARWLADTENRSDLIGGAGNVSLDDKDRMLAGVLLDLSMTATLSSSLNVGQKVLGNMGRVT 341

Query: 354 PFRSAYHRCASLMVLKAPDTPSVLFETGYISNADDALFLSSHEGQQAIARGVARAIDVHF 413
                    A  MVLK+PD PS+L ETG+ISN ++A  L+S   QQA+AR +   +  +F
Sbjct: 342 SLHKQRVEQAGFMVLKSPDIPSILVETGFISNNNEAAKLASSSHQQALARSIRTGVHQYF 401

Query: 414 ARKLAMGS 421
            +    G+
Sbjct: 402 QQNPPPGT 409