Pairwise Alignments

Query, 432 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 426 a.a., Prophage integrase IntA from Acinetobacter radioresistens SK82

 Score =  382 bits (980), Expect = e-110
 Identities = 210/440 (47%), Positives = 279/440 (63%), Gaps = 49/440 (11%)

Query: 1   MPKVAKVLTAPAVERLKADGKANRRVMVGGDRCEGLHLRLEGGAKVWALRLKIGER---- 56
           MPK +K L+A +V ++K  G+ +    VGG   +GL L +EG ++VW LR  +G+R    
Sbjct: 1   MPKKSKELSALSVAKIKNTGRHS----VGG--VDGLCLNVEGNSRVWILRAVVGKRLDKD 54

Query: 57  ------RRDIGLGRYNGKIGLTLEQSVREEGLSLAEARDKAREIRAKVRSGVDPIEEKRV 110
                 RRDIG+G Y                +SLAEAR KA E+R ++RSG+DPI  K+ 
Sbjct: 55  GKLKPHRRDIGIGPY--------------PEVSLAEARAKATELRLQIRSGIDPIAHKQE 100

Query: 111 QKQAAHIGTAKSKTFKECAELCISDKSGEWKNGKHVKQWSATLETYAYPKLGKLPVSSVD 170
           Q +  ++   + KTF ECA++ I++K+ E KN KH+ QW++TLETY YP LG + + ++ 
Sbjct: 101 QLEKLYVQKLRDKTFMECAKVVIANKTRELKNEKHIGQWTSTLETYIYPTLGDISIGTIT 160

Query: 171 RGLILDVLRPIWATKGETASRLRGRIETVLNWAKVNGYRDGENPAAWKGNLEHSLSKRQK 230
           +  I +VLRPIW  K ETA R+RGRIET+ ++AK  GY +G+NPA WKGNLE      ++
Sbjct: 161 KVDIAEVLRPIWIKKNETAKRIRGRIETIFDYAKAMGYFEGDNPAEWKGNLEPIFGNIKQ 220

Query: 231 LTRGHHASLPYAELGSFMADLRKRDGISARALEFAILTVARSGEVRKATWAEIDLDRKMW 290
            +R  H SLPY ++  F+  LR++ GIS +ALEFAILT  RSGE+  A W EID   K+W
Sbjct: 221 ESR-PHPSLPYEQVAGFIQHLRQKKGISPKALEFAILTACRSGEIFGAKWQEIDFKNKVW 279

Query: 291 VIPAERMKAGKEHRVPLSDAVVALLKALPR-VAGSDYVFPAPRGGAM-SDMALTAVLKRM 348
           +IP ERMKA KEHRVPLS   V LLK++       D++FPAPR GAM SDM+LT ++KRM
Sbjct: 280 IIPKERMKANKEHRVPLSQEAVNLLKSIQEYTQPQDFIFPAPRNGAMLSDMSLTILIKRM 339

Query: 349 DRAGL----------------TQHGFRSTFREWAGEVTAYPREVIEHALAHSLADKAEAA 392
               L                T HGFRSTFR+W+ + T YPREV EH LAH L D+ EAA
Sbjct: 340 HEQKLKENGLGYIDPKQNRVITTHGFRSTFRDWSADKTDYPREVCEHVLAHKLPDEVEAA 399

Query: 393 YQRGSLLPKRVKLMADWATY 412
           Y RG+ L KR  LMADWA +
Sbjct: 400 YLRGAYLEKRKGLMADWAEF 419