Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Dickeya dianthicola ME23

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 5/163 (3%)

Query: 20  GRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVAAFAALNRYDVTRPFQVWMS 79
           G + A+  LV R+Q  V  LV  +V + D   DV Q SF+ A+ AL  +     F  W+ 
Sbjct: 17  GDRKAFNLLVVRYQHKVASLVSRYVPAGDVP-DVVQESFIKAYRALESFRGESAFYTWLY 75

Query: 80  RIVINKCHDWR----RRRAVRNFFALALPLGEADGVADDAPLPDQAIGAEQQLAQAMKAI 135
           RI +N   ++     RR    +  A      E      +   P+  + +E+        I
Sbjct: 76  RIAVNTAKNYLVAQGRRPPSSDVDANDAENYENASALKEISNPENLMLSEELRRIVFHTI 135

Query: 136 AALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRAR 178
            +LP  L+  + LR +D  S  E A I+      V +R++RAR
Sbjct: 136 ESLPEDLRLAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAR 178