Pairwise Alignments

Query, 324 a.a., Putative FecR from Sphingobium sp. HT1-2

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 32/240 (13%)

Query: 84  RLWKVTAISAIAACLAILVGPALLLRMQADHMTAAGHLANIRLDDGSRIHLGPDSAIAVA 143
           RL +    +++   +A + G      + AD+ TA G    I L DG+R+ L   SA++VA
Sbjct: 166 RLKQAGVAASVVLLVAAVAGWQQAPILLADYHTAVGERQVITLTDGTRVTLNSASALSVA 225

Query: 144 YSVERRDVRLLKGQAWFEVHPDKSRPFRVRTDRISATALGTAFDVRMIGTDRSVAVGHGR 203
           +S   R V L  G+A FE   D SRPF V T           F V+    D  V +  G 
Sbjct: 226 FSEHERRVVLDAGEALFET-ADDSRPFVVETAGARVQGNAATFSVQR---DGHVVLARGE 281

Query: 204 VRIDESARNDSRQAAPKAVLNAGDWIAAVSGKGIDKGHQASDLAGIWQSGSVIIRGRTVA 263
            ++                   G+   AV+    D G Q +     WQ G +I  G+ + 
Sbjct: 282 AKV-------------------GEHELAVAA---DAGTQMA-----WQRGKLIFNGKPLG 314

Query: 264 DAIEELRPWYKGRILLANDDVGAKRVTGIYRLSDPEEALRALVEPHGGSITRITPWLMIV 323
             + EL  +  GRI+L++  + A  V+G++ L +PE  LR L + +G  +T + PWL +V
Sbjct: 315 QVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYL-PWLAVV 373