Pairwise Alignments

Query, 168 a.a., sigma factor from Sphingobium sp. HT1-2

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 4/155 (2%)

Query: 6   IYAAHRRALIDYAERIVGSRAEAEDVVQDAWLHLRQALGRGVLRDPVPYLYRIVRNLAID 65
           +Y +H   L  +    VG    A D+ QD ++ L +A     L++P  YL  I R L ID
Sbjct: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74

Query: 66  VQRRARRQSRHLAEGGDAHLAEVPDDTPSPEAVVAAQAELHCVEQALASLPERQRIAIEM 125
             R  RR      + G AHL E   + PS E  +     L  +++AL  L  R R A  +
Sbjct: 75  QFR--RRALERAYQEGLAHLPEA--EVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLL 130

Query: 126 YRLGGFKLREIADRLSISVSLTHLLIAQGLAECHR 160
            +L G  + ++A RL +S +     +A+ L  C+R
Sbjct: 131 AQLDGLSIVQVAQRLGVSRATVERDLAKALGACYR 165