Pairwise Alignments

Query, 191 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 168 a.a., RNA polymerase ECF-type sigma factor from Sphingobium sp. HT1-2

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 3/139 (2%)

Query: 25  QAARLVPTAEAEDLVQEAYARAINASHHREIVNPRSFVLTIIRNLAHERHRRATVVRFEH 84
           Q  R+   +++EDL+ +AY R   A+      N  +F++    N A + +RR  V     
Sbjct: 26  QVERMTRRSDSEDLLHDAYVRM--AARPERPDNEEAFLVRAAVNRARDSYRREKVRGPAG 83

Query: 85  LADMEAMEIADSAPDQFAVLSGNMELARLIALMEQLPPQARAVVKMRRIEGLLPGDIAVR 144
             D  A+ + D AP Q   L     L R+   ++QLPP+ R V  ++RI+ L   +IA R
Sbjct: 84  GEDALAL-LRDGAPLQDEALMAQARLRRVSEGIDQLPPRTREVFLLQRIDNLKYREIAER 142

Query: 145 MGLSVSTVEKHLAKGLAIL 163
           + +S S VEKH+A+ ++ L
Sbjct: 143 LDISQSAVEKHMARAMSFL 161