Pairwise Alignments

Query, 191 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 35  AEDLVQEAYARAINASHHREIVNPRSFVLTIIRNLAHERHRRATVVRFEHLADMEAMEIA 94
           AEDL Q+ + R +          PR+F+  + + L  +  RRA + +  +LA++  +  A
Sbjct: 37  AEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFDHFRRAALEQ-AYLAELALIPEA 95

Query: 95  DS-APD-QFAVLSGNMELARLIALMEQLPPQARAVVKMRRIEGLLPGDIAVRMGLSVSTV 152
           +  +P+ Q  +L    +L  +  L+ +L  +ARA     R++G+   +IA R+G+SVS V
Sbjct: 96  EQPSPEMQHLILE---DLKAIDRLLGKLSSKARAAFLHSRLDGMGHAEIAERLGVSVSRV 152

Query: 153 EKHLAKGLAILAYAMQEAP 171
            +++A+G+     A+   P
Sbjct: 153 RQYIAQGMRQCYVALYGEP 171