Pairwise Alignments

Query, 323 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 3e-28
 Identities = 76/217 (35%), Positives = 105/217 (48%), Gaps = 14/217 (6%)

Query: 18  ASSGRMHHGWILSGPRGIGKASFARAMAMRLLADAAGPKIEGEGLAVPESHPIRRLIEAS 77
           A   R  H ++L GP+GIGK + A  +  RLL        + +GL    +     L++A 
Sbjct: 16  AGRSRHAHAYLLHGPQGIGKRAMAERLMARLLCQ------QPQGLDACGACKSCLLLKAG 69

Query: 78  AHPDYAELAPLEKDGVTARNISVDQVRGLQRLIQSAPSLSSRRIVVIDSADDLERGAANA 137
           +HPD   L P E D    + I VDQVR L   +     L  R++V+I+  + +   A+NA
Sbjct: 70  SHPDNFVLEPEEAD----KPIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEAMNVNASNA 125

Query: 138 LLKTLEEPPADMIFLLVSHAPGRLLPTIRSRCRTMRFDPLSDGAMATVLRREDESLSGPE 197
           LLK+LEEP  D + LLV+H P RLLPTI+SRC+ +     S       L          E
Sbjct: 126 LLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQSQAWLAGALPDCDEVE 185

Query: 198 LDALLRAGEGSPGRALRYAGLDLAGLEKSLLAIAADG 234
            D LL    GSP   L    L   G+ +   A+  DG
Sbjct: 186 RDELLTLAAGSP---LMAVSLQAQGVREQ-RALVTDG 218