Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 163 a.a., RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 60.5 bits (145), Expect = 1e-14
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 30  LVPLLRGFYR--RRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMID 87
           L+PLL    R  R + G   D +D+VQ  L     R A + P+ A   W++A+AR    D
Sbjct: 11  LIPLLPRLRRLARALAGQVADADDLVQIVLERALARAAQWRPDAALDKWVFAIARNAWRD 70

Query: 88  HFRRVGRLRPI--DDLADSLVADEFEASSIARLDINDLLEQLPPKQARMIRAIRLEGLSV 145
             R  GR + +   + A  + AD   A    +L++   L  LPP    ++  + +EG+S 
Sbjct: 71  ELRARGRTQHLFAPEEAGEMAADRASAQPAQQLELAMALAALPPDHREVVALVLVEGMSY 130

Query: 146 AEAASAEGIGESDVKVSVHRGLKALMARV 174
            EAA    +    V   + R   +L A +
Sbjct: 131 GEAAELLEVPVGTVTSRLARARASLQAHL 159