Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 45.4 bits (106), Expect = 6e-10
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 11/167 (6%)

Query: 9   RALMIDGLGGDAAAHAALLRLLVPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYD 68
           R L+   L     A   L+R    L     +R VR  +D   ++ QDT + VH     Y 
Sbjct: 10  RELVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPED-ARELCQDTFLRVHQCLHQYR 68

Query: 69  PERAFTAWLYAVARYKMIDHF--RRVGRLRP--------IDDLADSLVADEFEASSIARL 118
            E A  +W+  VA    + H   +R+  + P        +++L D    +   A +    
Sbjct: 69  GESALKSWIGRVAYTIALRHLQHKRIALVEPGADNDFALVENLGDGFDLEAACADAETAR 128

Query: 119 DINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVKVSVHR 165
            ++  +E LPP Q  ++    LE  ++ E A   G+    +K  + R
Sbjct: 129 HLHAAIEALPPLQRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFR 175