Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 197 a.a., ECF RNA polymerase sigma factor EcfG from Xanthobacter sp. DMC5

 Score = 52.4 bits (124), Expect = 5e-12
 Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 9/158 (5%)

Query: 19  DAAAHAALLRLLVPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLY 78
           DAAA    +   +P +R F R   R   +  +D+VQ+TL+   +    +DP     AWL+
Sbjct: 15  DAAALRTQVLEFLPAVRAFARSLTRNRTE-ADDLVQETLLKALSNMDKFDPGTNLRAWLF 73

Query: 79  AVARYKMIDHFRRVGRLRPIDDLA-----DSLVADEFEASSIARLDINDLLEQLPPKQAR 133
            + R       R+  R R  D +A     DS +    E S+     + D L  LP  Q  
Sbjct: 74  TILRNTYYTEIRK--RRRENDGMAALAQQDSNIGPSQEWSA-TLTSLKDALALLPDDQRE 130

Query: 134 MIRAIRLEGLSVAEAASAEGIGESDVKVSVHRGLKALM 171
            +  +   GLS  EAA   G     +K  V+R    L+
Sbjct: 131 ALVLVGAAGLSYEEAAEVCGCALGTIKSRVNRARAKLL 168