Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 194 a.a., sigma-70 family RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 28/143 (19%)

Query: 34  LRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVG 93
           L  F RRR+R  DD  ED++QD             P    +AWL+  AR ++ID +R+  
Sbjct: 29  LGNFIRRRIRDPDD-AEDVLQDVFHEFVQAYRLPAPIEQASAWLFRAARNRIIDRYRK-K 86

Query: 94  RLRPIDDLADSLVADEFEASSIARLD----------------------INDLLEQLPPKQ 131
           + +P+ DL+    ADE  A    RLD                      + D L++LP  Q
Sbjct: 87  KEQPLADLS----ADEESADDEYRLDLALPAHDAGPEALYARAVLLKALQDALDELPANQ 142

Query: 132 ARMIRAIRLEGLSVAEAASAEGI 154
             +  A  LEG S  E A+  G+
Sbjct: 143 RDVFVAHELEGRSFKEMAAESGV 165