Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 200 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)

Query: 50  EDMVQDTLI-AVHTRRA-TYDPERAFTAWLYAVARYKMIDHFRRVGRLRPIDDLAD---- 103
           ED++QD  I A+HT +   Y+ E  F++W+  +A    IDHFR+  R  P+  L D    
Sbjct: 50  EDLMQDAFIKAIHTMKGGRYNEEGKFSSWICRIAHNLAIDHFRKEKR-SPVITLEDGSNV 108

Query: 104 ----SLVADEFEASSI---ARLDINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEGI 154
               S   D  E+  I       + +L++ LP  Q  ++       +S  E A A G+
Sbjct: 109 FNTMSFSEDSAESLQIKEDTHARLRELIQTLPQSQREVLMMRHYADMSFQEIADATGV 166