Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 202 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 18/168 (10%)

Query: 19  DAAAHAALLRLLVPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLY 78
           D  A+A L+ +    +     + VR ADD  ED+  +           ++PE AF+ WL+
Sbjct: 26  DEKAYAELMSIYKKPVYHVVLKMVRNADD-AEDLTIEAFAKAFKNLHKFNPEYAFSTWLF 84

Query: 79  AVARYKMIDHFRRVGRLRPID---------------DLADSLVADEFEASSIARLDIND- 122
            +A    ID F R  R++ +                D  D  +  + EA    +++I   
Sbjct: 85  RIATNNCID-FIRKNRIKTMSIDSAIKIDNGDEITIDFKDKNLNPQEEAIKNQKIEIMQY 143

Query: 123 LLEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVKVSVHRGLKAL 170
           ++ +LP K  R++       LS  E A+        VK  +HR  + L
Sbjct: 144 VVAKLPEKYQRLVTLRYFNELSYEEIATELNAPLGTVKAQLHRARELL 191