Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 177 a.a., RNA polymerase sigma factor from Magnetospirillum magneticum AMB-1

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 10/134 (7%)

Query: 50  EDMVQDTLI-AVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVGRLRPIDDLADSL--V 106
           ED+VQ+TL+ AV  ++A     R  T WL A+A   + DHFRR    R      +    +
Sbjct: 22  EDLVQETLLRAVAAQQAFAGRSRPLT-WLSAIALNALRDHFRRPATRREESAAPEDFAGL 80

Query: 107 ADEFE--ASSIARLDINDL----LEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVK 160
           AD+ E   +++ + ++ D     L  LP +   ++    + G   AE A+A GI E + +
Sbjct: 81  ADQCEDAVTALMKAEMGDCITAHLSALPDRLREVLVLHDMGGAGHAEVAAALGITEGNAR 140

Query: 161 VSVHRGLKALMARV 174
           V +HR   AL  R+
Sbjct: 141 VLLHRARAALRERL 154