Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 47  DDIEDMVQDTLIAVHTRRATYDPERAFTAWLYA-----VARYKMIDHFRRVGRLRPIDDL 101
           D+ +D+  D  I +  +   +  +  F+ WLY+        Y    + ++    + +DDL
Sbjct: 58  DEAQDLTHDIFIKLFFQLKKFKGDAKFSTWLYSFTYNFCVNYVQRKYQKKKETFQRLDDL 117

Query: 102 ADSLVADEFEASSIARLDINDL---LEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESD 158
                 +E + S I ++    L   L+ L P    ++    ++G+S  E   + G+GES 
Sbjct: 118 QHH-PYEEIDDSEIYKMQAERLQRSLQSLDPNDKMVLLMKYMDGMSHKEIQQSIGVGESA 176

Query: 159 VKVSVHRGLKALM 171
           VK+ ++R  + L+
Sbjct: 177 VKMRINRAKQRLL 189