Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 182 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 1/140 (0%)

Query: 34  LRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVG 93
           L  + R+RV    D  ED++Q  LI V       +     T WLY + +  + DH++R  
Sbjct: 16  LHAYVRKRVSNTYD-AEDILQTVLIKVTNHCEQRNDVAHITPWLYRITQNTINDHYKRSK 74

Query: 94  RLRPIDDLADSLVADEFEASSIARLDINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEG 153
           ++ P DD  +     E        + ++  ++QLP K AR +    ++G+   E A   G
Sbjct: 75  KIVPTDDQTNLSREQEGGYDEDFFVWLHKFMDQLPSKYARPLHLSDIKGVPQKEIAEKLG 134

Query: 154 IGESDVKVSVHRGLKALMAR 173
           +  +  K  + R  K L  R
Sbjct: 135 LSLTATKSRIQRARKILRER 154