Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 180 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 45  ADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVGRLRPIDDLADS 104
           + D  +D+VQD  I    RR + D   +  A+L    +YK+   FR+V +L   + L+ S
Sbjct: 43  SQDLAQDVVQDIFIDFWNRRKSLDINVSLKAYLLTAVKYKV---FRKVDKLNRHEQLSAS 99

Query: 105 LVADEFEASSIARL-DINDL----LEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDV 159
            + +   ++S     +I DL    LEQL P   ++ R  ++EG+SV E +    +    V
Sbjct: 100 HLEELSASASFMEFEEIFDLIEVKLEQLAPMHHKIFRMNKMEGVSVREISEQVNMAPQSV 159

Query: 160 KVSVHRGLKALMARVHG 176
              + +  K L   + G
Sbjct: 160 HNVLSKTTKYLKKELKG 176