Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 204 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 45.8 bits (107), Expect = 5e-10
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 4   TEGHLRALMIDGLGGDAAAHAALLRLLVPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTR 63
           TE  L AL+ +G   D  A   L     P + GF  +RV    D  E+ VQ   + +  +
Sbjct: 15  TEKRLVALVREG---DLNAFDELYHRYAPRVYGF-AKRVFHDKDVAEEAVQVVFVKLWEK 70

Query: 64  RATYDPERAFTAWLYAVARYKMIDHFRRVGRLRPIDDLA-----------DSLVADEFEA 112
           R   + +  F ++L+   ++++ +  R V     ++++            + L   EFE 
Sbjct: 71  RKGLNEQLNFKSYLFTAVKHQVYNRLREVKNTVDLEEMVTDHTYQGVSGLEVLEYKEFEE 130

Query: 113 SSIARLDINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVKVSVHRGLKALMA 172
           S++       L+E+LP  Q ++ +  RLEG+S  E A   G+    V+   +   K L  
Sbjct: 131 SALG------LIERLPNVQQKVFKLSRLEGVSHKEIAEKLGLSVRTVEHHCYLATKFLKG 184

Query: 173 RV 174
           ++
Sbjct: 185 QL 186